AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		105.664
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.5 nTPM
HPA:20.5 nTPM
GTEx:36.2 nTPM
FANTOM5:96.6 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:60.8 nTPM
Allen mouse:8.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA023629
Amygdala mean intensity 105.664
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 27.200
Basal medial amygdaloid nucleus 105.664
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 64.834
Cortical amygdala 18.513
Central amygdala 79.624
Medial amygdaloid nucleus 48.542

AMYGDALA - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Amygdala
nTPM: 13.0
2814 Male, age 76, right hemisphere 24.7
2517 Female, age 94, left hemisphere 13.3
2514 Male, age 75, right hemisphere 10.1
1987 Female, age 91, left hemisphere 8.6
2695 Female, age 67, right hemisphere 8.2
Basal amygdala
nTPM: 15.2
2110 Male, age 80, left hemisphere 27.8
1955 Male, age 76, both hemispheres 22.2
2685 Female, age 94, left hemisphere 16.1
2243 Female, age 91, right hemisphere 14.7
2827 Female, age 67, right hemisphere 7.4
2609 Male, age 75, right hemisphere 2.8
Central amygdala
nTPM: 12.1
2239 Male, age 80, left hemisphere 19.8
1905 Male, age 76, both hemispheres 16.5
2826 Female, age 94, left hemisphere 12.7
2701 Female, age 91, right hemisphere 7.7
2515 Male, age 75, right hemisphere 3.7
Corticomedial amygdala
nTPM: 17.0
2242 Female, age 91, right hemisphere 28.5
2829 Male, age 80, left hemisphere 27.3
2240 Male, age 76, both hemispheres 19.3
2429 Female, age 94, left hemisphere 13.3
2535 Female, age 67, right hemisphere 7.8
2428 Male, age 75, right hemisphere 5.5
Lateral amygdala
nTPM: 14.4
2534 Female, age 94, left hemisphere 25.2
1883 Male, age 76, both hemispheres 20.9
2256 Male, age 80, left hemisphere 13.7
2255 Female, age 91, right hemisphere 9.4
2830 Female, age 67, right hemisphere 9.4
2516 Male, age 75, right hemisphere 8.0
Stria terminalis, bed nucleus
nTPM: 20.5
1974 Female, age 91, both hemispheres 29.4
2486 Female, age 94, both hemispheres 26.5
2201 Male, age 74, unknown 5.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 36.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 36.2
Samples: 152

Max nTPM: 82.7
Min nTPM: 1.3
Std nTPM: 16.9
Median nTPM: 32.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 82.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 80.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 79.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 77.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 76.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 71.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 69.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 68.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 67.7
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 67.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 67.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 96.6
FF:10151-102I7 76 years, female 96.6

AMYGDALA - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Amygdala
nTPM: 18.8
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.3
Sample A Female 23.0
Sample B Female 18.2
Sample C Male 16.3
Sample D Male 17.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 60.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 60.8
Samples: 4

Max nTPM: 65.4
Min nTPM: 52.5
Sample A Male 65.4
Sample B Male 62.0
Sample C Female 52.5
Sample D Female 63.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.3
72472791 Antisense, RP_051101_02_E09, Mouse strain C57BL/6J (56 days, male) 8.8
69671899 Antisense, RP_050428_02_E12, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.