HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:93.1 nTPM
HPA:93.1 nTPM
GTEx:75.9 nTPM
FANTOM5:175.2 Scaled Tags Per Million
Pig:73.7 nTPM
Mouse:121.3 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044980
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.1
Sample id Sample description nTPM
Hippocampus
nTPM: 74.6
1898 Male, age 80, left hemisphere 91.6
2148 Female, age 91, left hemisphere 79.9
2621 Female, age 67, right hemisphere 77.2
1855 Male, age 76, left hemisphere 76.0
1911 Female, age 85, right hemisphere 61.6
2529 Female, age 94, left hemisphere 61.3
Dentate gyrus
nTPM: 77.6
1927 Female, age 91, both hemispheres 90.7
2531 Female, age 67, both hemispheres 80.9
2530 Female, age 94, left hemisphere 76.6
2010 Male, age 76, both hemispheres 76.3
2528 Male, age 74, both hemispheres 70.6
2246 Female, age 85, both hemispheres 70.3
Entorhinal gyrus
nTPM: 81.5
2764 Male, age 80, right hemisphere 94.4
2613 Female, age 94, left hemisphere 87.4
1938 Female, age 85, left hemisphere 87.1
1787 Male, age 76, left hemisphere 80.9
2686 Male, age 75, right hemisphere 74.8
2117 Female, age 91, right hemisphere 64.4
Hippocampus, CA1
nTPM: 84.8
2749 Male, age 80, left hemisphere 116.8
1873 Female, age 85, both hemispheres 83.6
2045 Male, age 76, both hemispheres 82.4
2527 Male, age 74, both hemispheres 72.9
2082 Female, age 91, right hemisphere 68.2
Hippocampus, CA2
nTPM: 74.6
1963 Male, age 80, left hemisphere 94.9
1892 Male, age 76, both hemispheres 92.2
1940 Female, age 85, left hemisphere 66.3
2113 Female, age 91, right hemisphere 66.1
2437 Female, age 94, left hemisphere 65.2
2249 Male, age 74, both hemispheres 63.1
Hippocampus, CA3
nTPM: 82.9
2137 Male, age 80, left hemisphere 99.8
2620 Female, age 94, left hemisphere 97.7
2861 Female, age 67, both hemispheres 93.7
1867 Male, age 76, both hemispheres 74.2
1891 Female, age 85, both hemispheres 69.7
2436 Male, age 74, both hemispheres 62.6
Parahippocampal cortex
nTPM: 76.3
1850 Male, age 80, both hemispheres 92.1
1933 Female, age 85, both hemispheres 84.8
1990 Female, age 91, right hemisphere 79.3
2693 Female, age 94, both hemispheres 78.9
2532 Female, age 72, left hemisphere 77.3
2245 Female, age 91, both hemispheres 74.1
2018 Male, age 76, both hemispheres 71.6
2622 Female, age 67, right hemisphere 70.0
2250 Female, age 67, right hemisphere 68.7
2692 Male, age 74, both hemispheres 66.2
Perirhinal gyrus
nTPM: 93.1
1847 Female, age 91, left hemisphere 102.3
1794 Male, age 80, right hemisphere 99.9
2848 Male, age 76, right hemisphere 89.1
1841 Female, age 85, right hemisphere 88.7
2521 Female, age 94, right hemisphere 85.7
Subiculum
nTPM: 66.7
1977 Female, age 85, both hemispheres 84.4
1901 Male, age 80, both hemispheres 78.4
2729 Female, age 91, right hemisphere 66.0
2619 Male, age 74, both hemispheres 65.3
2042 Male, age 76, both hemispheres 59.8
2438 Female, age 94, left hemisphere 46.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.9
Samples: 197

Max nTPM: 125.5
Min nTPM: 28.3
Std nTPM: 17.3
Median nTPM: 73.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 125.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 123.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 122.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 119.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 116.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 114.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 112.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 110.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 108.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 106.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 106.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 175.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 175.2
FF:10169-103B7 60 years, female 202.9
FF:10153-102I9 76 years, female 147.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.8
Samples: 4

Max nTPM: 96.8
Min nTPM: 48.3
Sample A Female 96.8
Sample B Female 79.9
Sample C Male 48.3
Sample D Male 54.0
Entorhinal cortex
nTPM: 65.0
Samples: 4

Max nTPM: 77.1
Min nTPM: 55.5
Sample A Female 69.6
Sample B Female 55.5
Sample C Male 77.1
Sample D Male 57.8
Subiculum
nTPM: 69.1
Samples: 4

Max nTPM: 97.7
Min nTPM: 51.1
Sample A Female 97.7
Sample B Female 59.4
Sample C Male 68.3
Sample D Male 51.1
Ventral hippocampus
nTPM: 73.8
Samples: 4

Max nTPM: 93.6
Min nTPM: 54.7
Sample A Female 73.1
Sample B Female 54.7
Sample C Male 93.6
Sample D Male 73.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.3
Samples: 4

Max nTPM: 139.9
Min nTPM: 108.8
Sample A Male 109.1
Sample B Male 108.8
Sample C Female 111.5
Sample D Female 139.9
Hippocampal formation
nTPM: 121.4
Samples: 4

Max nTPM: 128.7
Min nTPM: 108.1
Sample A Male 123.3
Sample B Male 125.3
Sample C Female 128.7
Sample D Female 108.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
70194624 Antisense, RP_050517_01_G05, Mouse strain C57BL/6J (56 days, male) 14.4
74957911 Antisense, RP_060315_05_A08, Mouse strain C57BL/6J (56 days, male) 12.8

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The Human Protein Atlas

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