HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.5 nTPM
HPA:48.5 nTPM
GTEx:33.5 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:21.7 nTPM
Mouse:9.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021283Antibody HPA021332
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
2148 Female, age 91, left hemisphere 43.2
1898 Male, age 80, left hemisphere 41.6
2621 Female, age 67, right hemisphere 40.7
2529 Female, age 94, left hemisphere 40.2
1855 Male, age 76, left hemisphere 39.4
1911 Female, age 85, right hemisphere 37.2
Dentate gyrus
nTPM: 42.4
1927 Female, age 91, both hemispheres 45.3
2528 Male, age 74, both hemispheres 44.2
2531 Female, age 67, both hemispheres 43.9
2246 Female, age 85, both hemispheres 42.5
2010 Male, age 76, both hemispheres 39.6
2530 Female, age 94, left hemisphere 39.0
Entorhinal gyrus
nTPM: 45.2
2764 Male, age 80, right hemisphere 49.0
2686 Male, age 75, right hemisphere 46.4
2613 Female, age 94, left hemisphere 45.3
1787 Male, age 76, left hemisphere 44.5
2117 Female, age 91, right hemisphere 43.1
1938 Female, age 85, left hemisphere 42.8
Hippocampus, CA1
nTPM: 44.0
2749 Male, age 80, left hemisphere 50.0
2082 Female, age 91, right hemisphere 46.0
2527 Male, age 74, both hemispheres 45.8
1873 Female, age 85, both hemispheres 39.2
2045 Male, age 76, both hemispheres 39.0
Hippocampus, CA2
nTPM: 44.3
2437 Female, age 94, left hemisphere 47.8
2249 Male, age 74, both hemispheres 46.4
2113 Female, age 91, right hemisphere 44.8
1892 Male, age 76, both hemispheres 44.7
1940 Female, age 85, left hemisphere 43.5
1963 Male, age 80, left hemisphere 38.3
Hippocampus, CA3
nTPM: 47.1
2436 Male, age 74, both hemispheres 61.4
2137 Male, age 80, left hemisphere 50.8
1867 Male, age 76, both hemispheres 46.5
2620 Female, age 94, left hemisphere 43.6
2861 Female, age 67, both hemispheres 40.3
1891 Female, age 85, both hemispheres 40.1
Parahippocampal cortex
nTPM: 47.7
2622 Female, age 67, right hemisphere 54.3
2693 Female, age 94, both hemispheres 53.6
1990 Female, age 91, right hemisphere 48.9
2250 Female, age 67, right hemisphere 48.4
2532 Female, age 72, left hemisphere 47.1
2245 Female, age 91, both hemispheres 46.8
1933 Female, age 85, both hemispheres 46.2
1850 Male, age 80, both hemispheres 45.8
2692 Male, age 74, both hemispheres 43.3
2018 Male, age 76, both hemispheres 42.5
Perirhinal gyrus
nTPM: 48.5
1794 Male, age 80, right hemisphere 49.6
1841 Female, age 85, right hemisphere 49.6
1847 Female, age 91, left hemisphere 49.4
2521 Female, age 94, right hemisphere 48.8
2848 Male, age 76, right hemisphere 45.0
Subiculum
nTPM: 44.6
2438 Female, age 94, left hemisphere 47.4
2619 Male, age 74, both hemispheres 47.1
1977 Female, age 85, both hemispheres 46.8
1901 Male, age 80, both hemispheres 44.3
2729 Female, age 91, right hemisphere 44.2
2042 Male, age 76, both hemispheres 37.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.5
Samples: 197

Max nTPM: 74.8
Min nTPM: 12.4
Std nTPM: 10.6
Median nTPM: 31.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 74.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 60.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 58.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 58.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 58.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 56.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 56.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 55.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 54.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.4
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 56.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 15.6
Sample A Female 22.2
Sample B Female 22.3
Sample C Male 25.0
Sample D Male 15.6
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 20.7
Min nTPM: 16.6
Sample A Female 16.6
Sample B Female 19.0
Sample C Male 20.7
Sample D Male 16.6
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 17.0
Sample A Female 18.0
Sample B Female 20.0
Sample C Male 19.8
Sample D Male 17.0
Ventral hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 27.8
Min nTPM: 17.8
Sample A Female 19.5
Sample B Female 17.8
Sample C Male 27.8
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.9
Min nTPM: 7.2
Sample A Male 7.2
Sample B Male 8.9
Sample C Female 8.4
Sample D Female 8.8
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 11.7
Min nTPM: 7.9
Sample A Male 11.7
Sample B Male 8.1
Sample C Female 7.9
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74819244 Antisense, RP_060315_02_C08, Mouse strain C57BL/6J (56 days, male) 0.1
68523336 Antisense, RP_050118_02_E10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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