HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.9 nTPM
HPA:50.9 nTPM
GTEx:42.5 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:78.3 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010649
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.9
Sample id Sample description nTPM
Hippocampus
nTPM: 50.5
1898 Male, age 80, left hemisphere 53.9
2621 Female, age 67, right hemisphere 52.2
1855 Male, age 76, left hemisphere 51.5
1911 Female, age 85, right hemisphere 49.0
2148 Female, age 91, left hemisphere 48.4
2529 Female, age 94, left hemisphere 48.3
Dentate gyrus
nTPM: 49.1
2010 Male, age 76, both hemispheres 51.8
1927 Female, age 91, both hemispheres 51.5
2530 Female, age 94, left hemisphere 50.8
2246 Female, age 85, both hemispheres 48.7
2528 Male, age 74, both hemispheres 46.7
2531 Female, age 67, both hemispheres 44.9
Entorhinal gyrus
nTPM: 47.6
1938 Female, age 85, left hemisphere 49.9
2764 Male, age 80, right hemisphere 48.9
2117 Female, age 91, right hemisphere 47.6
1787 Male, age 76, left hemisphere 47.3
2686 Male, age 75, right hemisphere 46.1
2613 Female, age 94, left hemisphere 45.7
Hippocampus, CA1
nTPM: 49.8
2749 Male, age 80, left hemisphere 52.9
1873 Female, age 85, both hemispheres 50.4
2045 Male, age 76, both hemispheres 49.5
2527 Male, age 74, both hemispheres 49.1
2082 Female, age 91, right hemisphere 46.9
Hippocampus, CA2
nTPM: 49.0
1892 Male, age 76, both hemispheres 52.1
2437 Female, age 94, left hemisphere 50.6
1963 Male, age 80, left hemisphere 49.7
2249 Male, age 74, both hemispheres 48.2
1940 Female, age 85, left hemisphere 47.0
2113 Female, age 91, right hemisphere 46.3
Hippocampus, CA3
nTPM: 50.9
2620 Female, age 94, left hemisphere 53.9
2436 Male, age 74, both hemispheres 51.7
1867 Male, age 76, both hemispheres 50.9
2861 Female, age 67, both hemispheres 50.7
2137 Male, age 80, left hemisphere 50.4
1891 Female, age 85, both hemispheres 47.6
Parahippocampal cortex
nTPM: 46.7
1933 Female, age 85, both hemispheres 48.8
2692 Male, age 74, both hemispheres 48.8
2250 Female, age 67, right hemisphere 47.9
1850 Male, age 80, both hemispheres 47.3
2018 Male, age 76, both hemispheres 47.1
2532 Female, age 72, left hemisphere 46.7
2622 Female, age 67, right hemisphere 45.7
1990 Female, age 91, right hemisphere 45.4
2693 Female, age 94, both hemispheres 45.4
2245 Female, age 91, both hemispheres 44.3
Perirhinal gyrus
nTPM: 48.8
1794 Male, age 80, right hemisphere 52.0
1847 Female, age 91, left hemisphere 51.2
1841 Female, age 85, right hemisphere 47.9
2521 Female, age 94, right hemisphere 47.4
2848 Male, age 76, right hemisphere 45.5
Subiculum
nTPM: 47.6
2619 Male, age 74, both hemispheres 50.3
1901 Male, age 80, both hemispheres 48.5
2042 Male, age 76, both hemispheres 48.3
1977 Female, age 85, both hemispheres 47.2
2729 Female, age 91, right hemisphere 46.7
2438 Female, age 94, left hemisphere 44.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.5
Samples: 197

Max nTPM: 80.8
Min nTPM: 22.5
Std nTPM: 9.0
Median nTPM: 40.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 80.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 71.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 66.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 65.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 60.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 59.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.4
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 29.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 25.6
Min nTPM: 12.7
Sample A Female 25.6
Sample B Female 17.6
Sample C Male 19.6
Sample D Male 12.7
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.4
Sample A Female 15.9
Sample B Female 14.8
Sample C Male 13.5
Sample D Male 11.4
Subiculum
nTPM: 14.7
Samples: 4

Max nTPM: 18.7
Min nTPM: 11.5
Sample A Female 18.7
Sample B Female 13.7
Sample C Male 14.7
Sample D Male 11.5
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 22.2
Min nTPM: 12.1
Sample A Female 17.4
Sample B Female 12.1
Sample C Male 22.2
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.7
Samples: 4

Max nTPM: 78.2
Min nTPM: 68.7
Sample A Male 69.0
Sample B Male 68.7
Sample C Female 78.2
Sample D Female 70.9
Hippocampal formation
nTPM: 78.3
Samples: 4

Max nTPM: 82.3
Min nTPM: 73.6
Sample A Male 80.3
Sample B Male 73.6
Sample C Female 76.9
Sample D Female 82.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
513235 Antisense, RP_040810_01_D02, Mouse strain C57BL/6J (56 days, male) 5.1

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