HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:114.3 nTPM
HPA:114.3 nTPM
GTEx:116.4 nTPM
FANTOM5:50.2 Scaled Tags Per Million
Pig:54.8 nTPM
Mouse:92.1 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015967
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.3
Sample id Sample description nTPM
Hippocampus
nTPM: 97.9
1898 Male, age 80, left hemisphere 107.6
2621 Female, age 67, right hemisphere 104.0
2529 Female, age 94, left hemisphere 96.9
2148 Female, age 91, left hemisphere 96.8
1855 Male, age 76, left hemisphere 92.5
1911 Female, age 85, right hemisphere 89.7
Dentate gyrus
nTPM: 98.5
2531 Female, age 67, both hemispheres 103.8
2530 Female, age 94, left hemisphere 100.1
1927 Female, age 91, both hemispheres 99.7
2246 Female, age 85, both hemispheres 99.3
2010 Male, age 76, both hemispheres 94.5
2528 Male, age 74, both hemispheres 93.4
Entorhinal gyrus
nTPM: 113.0
2613 Female, age 94, left hemisphere 135.9
2686 Male, age 75, right hemisphere 115.3
2764 Male, age 80, right hemisphere 112.9
1938 Female, age 85, left hemisphere 112.1
1787 Male, age 76, left hemisphere 109.0
2117 Female, age 91, right hemisphere 92.9
Hippocampus, CA1
nTPM: 102.4
2749 Male, age 80, left hemisphere 119.0
2527 Male, age 74, both hemispheres 105.5
1873 Female, age 85, both hemispheres 100.3
2045 Male, age 76, both hemispheres 94.3
2082 Female, age 91, right hemisphere 93.1
Hippocampus, CA2
nTPM: 99.3
2437 Female, age 94, left hemisphere 109.4
1892 Male, age 76, both hemispheres 105.1
1963 Male, age 80, left hemisphere 101.7
1940 Female, age 85, left hemisphere 94.2
2249 Male, age 74, both hemispheres 93.0
2113 Female, age 91, right hemisphere 92.4
Hippocampus, CA3
nTPM: 100.3
2861 Female, age 67, both hemispheres 113.3
2137 Male, age 80, left hemisphere 107.5
2620 Female, age 94, left hemisphere 101.2
1867 Male, age 76, both hemispheres 95.8
1891 Female, age 85, both hemispheres 92.0
2436 Male, age 74, both hemispheres 92.0
Parahippocampal cortex
nTPM: 109.6
2622 Female, age 67, right hemisphere 118.3
2245 Female, age 91, both hemispheres 117.6
2693 Female, age 94, both hemispheres 114.0
2532 Female, age 72, left hemisphere 112.4
1850 Male, age 80, both hemispheres 111.8
2692 Male, age 74, both hemispheres 110.5
1933 Female, age 85, both hemispheres 108.3
2250 Female, age 67, right hemisphere 106.5
1990 Female, age 91, right hemisphere 106.2
2018 Male, age 76, both hemispheres 90.7
Perirhinal gyrus
nTPM: 114.3
1847 Female, age 91, left hemisphere 123.8
2521 Female, age 94, right hemisphere 116.5
1794 Male, age 80, right hemisphere 114.5
1841 Female, age 85, right hemisphere 110.5
2848 Male, age 76, right hemisphere 106.4
Subiculum
nTPM: 97.5
2619 Male, age 74, both hemispheres 107.6
1977 Female, age 85, both hemispheres 104.5
2438 Female, age 94, left hemisphere 103.3
1901 Male, age 80, both hemispheres 98.4
2729 Female, age 91, right hemisphere 88.1
2042 Male, age 76, both hemispheres 83.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 116.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 116.4
Samples: 197

Max nTPM: 252.1
Min nTPM: 32.1
Std nTPM: 45.8
Median nTPM: 115.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 252.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 231.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 205.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 204.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 202.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 199.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 195.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 193.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 193.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 191.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 190.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.2
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.4
Samples: 4

Max nTPM: 65.4
Min nTPM: 34.7
Sample A Female 65.4
Sample B Female 51.7
Sample C Male 49.9
Sample D Male 34.7
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 40.6
Min nTPM: 29.1
Sample A Female 40.6
Sample B Female 31.8
Sample C Male 39.4
Sample D Male 29.1
Subiculum
nTPM: 54.8
Samples: 4

Max nTPM: 77.0
Min nTPM: 36.4
Sample A Female 77.0
Sample B Female 47.3
Sample C Male 58.5
Sample D Male 36.4
Ventral hippocampus
nTPM: 51.9
Samples: 4

Max nTPM: 71.4
Min nTPM: 32.7
Sample A Female 51.6
Sample B Female 32.7
Sample C Male 71.4
Sample D Male 51.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.1
Samples: 4

Max nTPM: 118.5
Min nTPM: 73.5
Sample A Male 73.5
Sample B Male 76.3
Sample C Female 100.2
Sample D Female 118.5
Hippocampal formation
nTPM: 81.2
Samples: 4

Max nTPM: 86.2
Min nTPM: 74.7
Sample A Male 86.2
Sample B Male 78.1
Sample C Female 74.7
Sample D Female 85.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
74579404 Antisense, RP_060215_01_C07, Mouse strain C57BL/6J (56 days, male) 10.0
79912548 Antisense, RP_080109_01_B02, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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