HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.8 nTPM
HPA:15.8 nTPM
GTEx:10.5 nTPM
FANTOM5:163.4 Scaled Tags Per Million
Pig:81.6 nTPM
Mouse:164.5 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049627
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 2.7
1898 Male, age 80, left hemisphere 12.0
1855 Male, age 76, left hemisphere 2.6
2621 Female, age 67, right hemisphere 1.8
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 2.9
2531 Female, age 67, both hemispheres 11.8
2010 Male, age 76, both hemispheres 3.1
1927 Female, age 91, both hemispheres 2.9
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 6.3
2613 Female, age 94, left hemisphere 18.9
2764 Male, age 80, right hemisphere 12.0
1938 Female, age 85, left hemisphere 5.7
1787 Male, age 76, left hemisphere 0.6
2686 Male, age 75, right hemisphere 0.6
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 7.9
2749 Male, age 80, left hemisphere 18.6
2082 Female, age 91, right hemisphere 9.0
2045 Male, age 76, both hemispheres 7.0
2527 Male, age 74, both hemispheres 5.0
1873 Female, age 85, both hemispheres 0.0
Hippocampus, CA2
nTPM: 3.4
1940 Female, age 85, left hemisphere 8.2
2437 Female, age 94, left hemisphere 3.7
2113 Female, age 91, right hemisphere 3.6
1892 Male, age 76, both hemispheres 3.4
1963 Male, age 80, left hemisphere 1.5
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 5.2
2620 Female, age 94, left hemisphere 14.4
2137 Male, age 80, left hemisphere 11.1
2861 Female, age 67, both hemispheres 4.9
2436 Male, age 74, both hemispheres 0.8
1867 Male, age 76, both hemispheres 0.3
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 5.8
2250 Female, age 67, right hemisphere 13.9
1850 Male, age 80, both hemispheres 10.1
2245 Female, age 91, both hemispheres 9.0
1990 Female, age 91, right hemisphere 7.4
2693 Female, age 94, both hemispheres 6.3
1933 Female, age 85, both hemispheres 5.9
2018 Male, age 76, both hemispheres 4.0
2622 Female, age 67, right hemisphere 1.8
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 15.8
1847 Female, age 91, left hemisphere 33.3
2521 Female, age 94, right hemisphere 22.7
1794 Male, age 80, right hemisphere 13.1
1841 Female, age 85, right hemisphere 7.3
2848 Male, age 76, right hemisphere 2.6
Subiculum
nTPM: 2.7
1977 Female, age 85, both hemispheres 9.3
1901 Male, age 80, both hemispheres 5.1
2438 Female, age 94, left hemisphere 1.5
2619 Male, age 74, both hemispheres 0.1
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 38.8
Min nTPM: 0.2
Std nTPM: 7.9
Median nTPM: 8.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 38.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 36.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 32.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 30.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 27.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 27.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 26.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 163.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 163.4
FF:10169-103B7 60 years, female 230.1
FF:10153-102I9 76 years, female 96.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.9
Samples: 4

Max nTPM: 52.3
Min nTPM: 35.6
Sample A Female 51.5
Sample B Female 52.3
Sample C Male 35.6
Sample D Male 44.0
Entorhinal cortex
nTPM: 81.6
Samples: 4

Max nTPM: 96.4
Min nTPM: 64.0
Sample A Female 96.4
Sample B Female 64.0
Sample C Male 87.5
Sample D Male 78.6
Subiculum
nTPM: 62.9
Samples: 4

Max nTPM: 80.8
Min nTPM: 51.4
Sample A Female 80.8
Sample B Female 51.4
Sample C Male 67.9
Sample D Male 51.6
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 56.9
Min nTPM: 34.0
Sample A Female 51.6
Sample B Female 34.0
Sample C Male 48.6
Sample D Male 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 164.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 164.5
Samples: 4

Max nTPM: 187.5
Min nTPM: 126.1
Sample A Male 174.0
Sample B Male 187.5
Sample C Female 126.1
Sample D Female 170.4
Hippocampal formation
nTPM: 123.9
Samples: 4

Max nTPM: 148.6
Min nTPM: 109.7
Sample A Male 112.2
Sample B Male 125.1
Sample C Female 148.6
Sample D Female 109.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
72080025 Antisense, RP_051017_03_B11, Mouse strain C57BL/6J (56 days, male) 20.4
68919824 Antisense, RP_050301_02_F02, Mouse strain C57BL/6J (56 days, male) 15.3

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The Human Protein Atlas

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