HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.2 nTPM
HPA:18.2 nTPM
GTEx:21.6 nTPM
FANTOM5:27.2 Scaled Tags Per Million
Pig:9.4 nTPM
Mouse:68.7 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022824
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.2
Sample id Sample description nTPM
Hippocampus
nTPM: 17.1
1898 Male, age 80, left hemisphere 18.6
2148 Female, age 91, left hemisphere 17.5
1911 Female, age 85, right hemisphere 17.0
2621 Female, age 67, right hemisphere 16.8
1855 Male, age 76, left hemisphere 16.5
2529 Female, age 94, left hemisphere 16.3
Dentate gyrus
nTPM: 16.8
1927 Female, age 91, both hemispheres 18.2
2010 Male, age 76, both hemispheres 17.0
2528 Male, age 74, both hemispheres 16.7
2531 Female, age 67, both hemispheres 16.7
2530 Female, age 94, left hemisphere 16.6
2246 Female, age 85, both hemispheres 15.8
Entorhinal gyrus
nTPM: 17.0
1787 Male, age 76, left hemisphere 17.7
2117 Female, age 91, right hemisphere 17.2
1938 Female, age 85, left hemisphere 17.0
2613 Female, age 94, left hemisphere 17.0
2764 Male, age 80, right hemisphere 16.7
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 18.2
2749 Male, age 80, left hemisphere 23.6
2527 Male, age 74, both hemispheres 17.4
1873 Female, age 85, both hemispheres 17.2
2082 Female, age 91, right hemisphere 16.8
2045 Male, age 76, both hemispheres 16.1
Hippocampus, CA2
nTPM: 17.0
1892 Male, age 76, both hemispheres 19.2
1963 Male, age 80, left hemisphere 19.1
1940 Female, age 85, left hemisphere 16.4
2113 Female, age 91, right hemisphere 16.4
2249 Male, age 74, both hemispheres 15.8
2437 Female, age 94, left hemisphere 15.1
Hippocampus, CA3
nTPM: 17.6
2137 Male, age 80, left hemisphere 20.2
1867 Male, age 76, both hemispheres 18.8
2436 Male, age 74, both hemispheres 17.3
2861 Female, age 67, both hemispheres 16.5
1891 Female, age 85, both hemispheres 16.4
2620 Female, age 94, left hemisphere 16.4
Parahippocampal cortex
nTPM: 16.4
2250 Female, age 67, right hemisphere 17.8
2245 Female, age 91, both hemispheres 17.5
1990 Female, age 91, right hemisphere 17.0
1850 Male, age 80, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.7
2692 Male, age 74, both hemispheres 16.0
2018 Male, age 76, both hemispheres 15.9
2693 Female, age 94, both hemispheres 15.8
2532 Female, age 72, left hemisphere 15.4
2622 Female, age 67, right hemisphere 14.6
Perirhinal gyrus
nTPM: 17.4
1847 Female, age 91, left hemisphere 18.6
1794 Male, age 80, right hemisphere 18.4
2521 Female, age 94, right hemisphere 17.8
1841 Female, age 85, right hemisphere 16.7
2848 Male, age 76, right hemisphere 15.4
Subiculum
nTPM: 16.6
1901 Male, age 80, both hemispheres 18.2
1977 Female, age 85, both hemispheres 17.8
2729 Female, age 91, right hemisphere 16.6
2619 Male, age 74, both hemispheres 15.9
2042 Male, age 76, both hemispheres 15.7
2438 Female, age 94, left hemisphere 15.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.6
Samples: 197

Max nTPM: 57.2
Min nTPM: 6.2
Std nTPM: 8.9
Median nTPM: 20.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 57.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 52.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 48.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 47.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 47.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 41.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 40.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 39.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.2
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.7
Sample A Female 11.2
Sample B Female 10.5
Sample C Male 7.7
Sample D Male 8.4
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 10.2
Sample C Male 7.3
Sample D Male 7.5
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.9
Sample A Female 8.9
Sample B Female 7.9
Sample C Male 6.9
Sample D Male 7.2
Ventral hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 9.2
Min nTPM: 8.4
Sample A Female 8.5
Sample B Female 9.0
Sample C Male 8.4
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.7
Samples: 4

Max nTPM: 71.0
Min nTPM: 65.3
Sample A Male 69.2
Sample B Male 69.1
Sample C Female 71.0
Sample D Female 65.3
Hippocampal formation
nTPM: 67.0
Samples: 4

Max nTPM: 74.4
Min nTPM: 62.3
Sample A Male 74.4
Sample B Male 64.5
Sample C Female 66.9
Sample D Female 62.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
67881762 Antisense, RP_040920_02_F12, Mouse strain C57BL/6J (56 days, male) 4.0

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