HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.6 nTPM
HPA:11.6 nTPM
GTEx:11.2 nTPM
FANTOM5:19.3 Scaled Tags Per Million
Pig:2.1 nTPM
Mouse:4.5 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.6
Sample id Sample description nTPM
Hippocampus
nTPM: 10.2
2621 Female, age 67, right hemisphere 11.6
2148 Female, age 91, left hemisphere 11.5
2529 Female, age 94, left hemisphere 11.1
1898 Male, age 80, left hemisphere 9.0
1911 Female, age 85, right hemisphere 8.9
1855 Male, age 76, left hemisphere 8.8
Dentate gyrus
nTPM: 10.7
2531 Female, age 67, both hemispheres 13.6
2246 Female, age 85, both hemispheres 11.5
1927 Female, age 91, both hemispheres 10.6
2010 Male, age 76, both hemispheres 9.8
2530 Female, age 94, left hemisphere 9.7
2528 Male, age 74, both hemispheres 9.1
Entorhinal gyrus
nTPM: 11.6
2613 Female, age 94, left hemisphere 13.9
2686 Male, age 75, right hemisphere 12.8
2764 Male, age 80, right hemisphere 11.6
1787 Male, age 76, left hemisphere 10.9
2117 Female, age 91, right hemisphere 10.4
1938 Female, age 85, left hemisphere 9.7
Hippocampus, CA1
nTPM: 10.4
2082 Female, age 91, right hemisphere 11.6
2527 Male, age 74, both hemispheres 10.7
2045 Male, age 76, both hemispheres 10.3
2749 Male, age 80, left hemisphere 10.3
1873 Female, age 85, both hemispheres 9.0
Hippocampus, CA2
nTPM: 10.1
2113 Female, age 91, right hemisphere 12.5
1940 Female, age 85, left hemisphere 10.9
1963 Male, age 80, left hemisphere 10.2
2437 Female, age 94, left hemisphere 10.1
1892 Male, age 76, both hemispheres 9.8
2249 Male, age 74, both hemispheres 7.5
Hippocampus, CA3
nTPM: 11.2
2861 Female, age 67, both hemispheres 12.8
2620 Female, age 94, left hemisphere 11.5
2137 Male, age 80, left hemisphere 11.0
1867 Male, age 76, both hemispheres 10.8
2436 Male, age 74, both hemispheres 10.5
1891 Female, age 85, both hemispheres 10.3
Parahippocampal cortex
nTPM: 11.0
2622 Female, age 67, right hemisphere 13.0
2245 Female, age 91, both hemispheres 11.7
2018 Male, age 76, both hemispheres 11.5
2532 Female, age 72, left hemisphere 11.0
1990 Female, age 91, right hemisphere 10.9
2693 Female, age 94, both hemispheres 10.8
1850 Male, age 80, both hemispheres 10.7
2692 Male, age 74, both hemispheres 10.5
2250 Female, age 67, right hemisphere 10.0
1933 Female, age 85, both hemispheres 9.9
Perirhinal gyrus
nTPM: 10.9
2521 Female, age 94, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.6
2848 Male, age 76, right hemisphere 11.3
1841 Female, age 85, right hemisphere 10.0
1794 Male, age 80, right hemisphere 9.8
Subiculum
nTPM: 9.8
1901 Male, age 80, both hemispheres 10.9
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 10.3
2729 Female, age 91, right hemisphere 9.6
2438 Female, age 94, left hemisphere 9.4
2042 Male, age 76, both hemispheres 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 24.6
Min nTPM: 4.6
Std nTPM: 2.5
Median nTPM: 10.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 24.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 20.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 18.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 16.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 16.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 15.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 15.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 15.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 15.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 14.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.3
FF:10153-102I9 76 years, female 19.8
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.7
Sample A Female 1.8
Sample B Female 1.7
Sample C Male 2.2
Sample D Male 1.9
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.7
Sample A Female 2.1
Sample B Female 2.1
Sample C Male 1.8
Sample D Male 1.7
Subiculum
nTPM: 2.0
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.9
Sample A Female 2.1
Sample B Female 1.9
Sample C Male 2.1
Sample D Male 1.9
Ventral hippocampus
nTPM: 2.1
Samples: 4

Max nTPM: 2.3
Min nTPM: 2.0
Sample A Female 2.0
Sample B Female 2.0
Sample C Male 2.3
Sample D Male 2.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.0
Sample A Male 4.6
Sample B Male 4.4
Sample C Female 4.0
Sample D Female 5.2
Hippocampal formation
nTPM: 3.9
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.1
Sample A Male 3.2
Sample B Male 4.8
Sample C Female 4.4
Sample D Female 3.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
69548846 Antisense, RP_050426_02_D07, Mouse strain C57BL/6J (56 days, male) 6.2

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