HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.7 nTPM
HPA:21.7 nTPM
GTEx:24.5 nTPM
FANTOM5:68.0 Scaled Tags Per Million
Pig:9.6 nTPM
Mouse:10.2 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015593Antibody HPA015603
Glial cells HighNot detected
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.2
1911 Female, age 85, right hemisphere 22.9
2529 Female, age 94, left hemisphere 22.1
1855 Male, age 76, left hemisphere 20.9
2621 Female, age 67, right hemisphere 20.5
2148 Female, age 91, left hemisphere 20.2
1898 Male, age 80, left hemisphere 14.7
Dentate gyrus
nTPM: 21.3
2530 Female, age 94, left hemisphere 23.8
2246 Female, age 85, both hemispheres 23.4
2531 Female, age 67, both hemispheres 22.4
2010 Male, age 76, both hemispheres 21.6
1927 Female, age 91, both hemispheres 18.9
2528 Male, age 74, both hemispheres 17.7
Entorhinal gyrus
nTPM: 21.7
2686 Male, age 75, right hemisphere 24.2
2613 Female, age 94, left hemisphere 24.1
2764 Male, age 80, right hemisphere 21.1
2117 Female, age 91, right hemisphere 20.7
1938 Female, age 85, left hemisphere 20.5
1787 Male, age 76, left hemisphere 19.5
Hippocampus, CA1
nTPM: 20.8
2045 Male, age 76, both hemispheres 23.5
2082 Female, age 91, right hemisphere 21.7
1873 Female, age 85, both hemispheres 20.0
2527 Male, age 74, both hemispheres 19.6
2749 Male, age 80, left hemisphere 19.2
Hippocampus, CA2
nTPM: 20.1
2113 Female, age 91, right hemisphere 24.7
1940 Female, age 85, left hemisphere 21.0
2437 Female, age 94, left hemisphere 20.4
2249 Male, age 74, both hemispheres 19.8
1963 Male, age 80, left hemisphere 17.9
1892 Male, age 76, both hemispheres 16.9
Hippocampus, CA3
nTPM: 20.1
2861 Female, age 67, both hemispheres 22.7
1891 Female, age 85, both hemispheres 22.6
2137 Male, age 80, left hemisphere 20.2
2436 Male, age 74, both hemispheres 19.8
2620 Female, age 94, left hemisphere 19.8
1867 Male, age 76, both hemispheres 15.4
Parahippocampal cortex
nTPM: 21.3
2532 Female, age 72, left hemisphere 24.1
2018 Male, age 76, both hemispheres 22.7
2692 Male, age 74, both hemispheres 22.6
2245 Female, age 91, both hemispheres 22.1
1933 Female, age 85, both hemispheres 21.2
2693 Female, age 94, both hemispheres 21.1
2622 Female, age 67, right hemisphere 21.0
2250 Female, age 67, right hemisphere 20.0
1990 Female, age 91, right hemisphere 19.2
1850 Male, age 80, both hemispheres 19.1
Perirhinal gyrus
nTPM: 19.4
2848 Male, age 76, right hemisphere 20.9
2521 Female, age 94, right hemisphere 20.8
1841 Female, age 85, right hemisphere 20.4
1794 Male, age 80, right hemisphere 17.8
1847 Female, age 91, left hemisphere 17.2
Subiculum
nTPM: 21.0
2042 Male, age 76, both hemispheres 24.9
1901 Male, age 80, both hemispheres 22.5
2729 Female, age 91, right hemisphere 21.4
2619 Male, age 74, both hemispheres 20.6
1977 Female, age 85, both hemispheres 19.4
2438 Female, age 94, left hemisphere 17.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.5
Samples: 197

Max nTPM: 73.2
Min nTPM: 10.6
Std nTPM: 10.9
Median nTPM: 21.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 73.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 70.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 60.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 57.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 56.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 53.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 51.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 50.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 48.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 43.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.0
FF:10153-102I9 76 years, female 69.0
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.7
Sample A Female 9.9
Sample B Female 8.9
Sample C Male 11.1
Sample D Male 8.7
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.0
Sample A Female 9.4
Sample B Female 9.1
Sample C Male 8.0
Sample D Male 9.7
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 11.0
Min nTPM: 7.9
Sample A Female 11.0
Sample B Female 7.9
Sample C Male 8.1
Sample D Male 9.1
Ventral hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.1
Sample A Female 10.1
Sample B Female 8.9
Sample C Male 6.1
Sample D Male 8.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.3
Sample A Male 9.6
Sample B Male 8.7
Sample C Female 12.5
Sample D Female 8.3
Hippocampal formation
nTPM: 10.2
Samples: 4

Max nTPM: 12.8
Min nTPM: 7.7
Sample A Male 10.7
Sample B Male 9.6
Sample C Female 12.8
Sample D Female 7.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
69526432 Antisense, RP_050419_04_G11, Mouse strain C57BL/6J (56 days, male) 1.2

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