HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:80.1 nTPM
HPA:80.1 nTPM
GTEx:74.7 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Pig:8.2 nTPM
Mouse:9.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058400
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.1
Sample id Sample description nTPM
Hippocampus
nTPM: 79.0
2529 Female, age 94, left hemisphere 80.7
1898 Male, age 80, left hemisphere 80.5
1855 Male, age 76, left hemisphere 79.3
2148 Female, age 91, left hemisphere 78.5
1911 Female, age 85, right hemisphere 77.7
2621 Female, age 67, right hemisphere 77.1
Dentate gyrus
nTPM: 80.1
2530 Female, age 94, left hemisphere 83.8
2010 Male, age 76, both hemispheres 81.3
2528 Male, age 74, both hemispheres 79.5
2531 Female, age 67, both hemispheres 79.2
2246 Female, age 85, both hemispheres 78.8
1927 Female, age 91, both hemispheres 78.1
Entorhinal gyrus
nTPM: 78.7
1938 Female, age 85, left hemisphere 81.1
2117 Female, age 91, right hemisphere 80.7
1787 Male, age 76, left hemisphere 79.4
2686 Male, age 75, right hemisphere 79.3
2764 Male, age 80, right hemisphere 77.4
2613 Female, age 94, left hemisphere 74.4
Hippocampus, CA1
nTPM: 78.7
2749 Male, age 80, left hemisphere 79.8
2527 Male, age 74, both hemispheres 79.1
2045 Male, age 76, both hemispheres 78.9
1873 Female, age 85, both hemispheres 78.6
2082 Female, age 91, right hemisphere 77.1
Hippocampus, CA2
nTPM: 80.0
2249 Male, age 74, both hemispheres 81.7
2437 Female, age 94, left hemisphere 81.1
1940 Female, age 85, left hemisphere 80.5
1963 Male, age 80, left hemisphere 80.4
1892 Male, age 76, both hemispheres 79.4
2113 Female, age 91, right hemisphere 77.1
Hippocampus, CA3
nTPM: 78.7
2436 Male, age 74, both hemispheres 80.9
1867 Male, age 76, both hemispheres 80.4
1891 Female, age 85, both hemispheres 79.4
2137 Male, age 80, left hemisphere 79.1
2861 Female, age 67, both hemispheres 76.1
2620 Female, age 94, left hemisphere 76.0
Parahippocampal cortex
nTPM: 77.8
2018 Male, age 76, both hemispheres 80.8
1990 Female, age 91, right hemisphere 80.6
1850 Male, age 80, both hemispheres 78.6
2692 Male, age 74, both hemispheres 78.4
2250 Female, age 67, right hemisphere 78.3
2245 Female, age 91, both hemispheres 77.0
2693 Female, age 94, both hemispheres 76.5
1933 Female, age 85, both hemispheres 76.3
2532 Female, age 72, left hemisphere 76.0
2622 Female, age 67, right hemisphere 75.1
Perirhinal gyrus
nTPM: 78.3
1794 Male, age 80, right hemisphere 78.8
2521 Female, age 94, right hemisphere 78.8
1841 Female, age 85, right hemisphere 78.6
1847 Female, age 91, left hemisphere 78.1
2848 Male, age 76, right hemisphere 77.2
Subiculum
nTPM: 78.3
2042 Male, age 76, both hemispheres 81.7
1901 Male, age 80, both hemispheres 79.9
1977 Female, age 85, both hemispheres 78.7
2729 Female, age 91, right hemisphere 77.7
2619 Male, age 74, both hemispheres 77.5
2438 Female, age 94, left hemisphere 74.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.7
Samples: 197

Max nTPM: 174.9
Min nTPM: 33.8
Std nTPM: 20.5
Median nTPM: 70.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 174.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 155.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 147.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 136.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 129.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 117.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 117.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 115.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 114.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 114.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 111.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.7
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 20.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 10.9
Min nTPM: 5.8
Sample A Female 10.9
Sample B Female 7.5
Sample C Male 8.6
Sample D Male 5.8
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 10.4
Min nTPM: 5.5
Sample A Female 7.2
Sample B Female 10.4
Sample C Male 6.7
Sample D Male 5.5
Subiculum
nTPM: 7.1
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.5
Sample A Female 8.9
Sample B Female 7.1
Sample C Male 5.5
Sample D Male 6.9
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.9
Sample A Female 9.4
Sample B Female 6.9
Sample C Male 7.4
Sample D Male 7.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 9.8
Sample C Female 10.0
Sample D Female 10.3
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 11.7
Min nTPM: 5.8
Sample A Male 5.8
Sample B Male 7.5
Sample C Female 11.7
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
75198160 Antisense, RP_060502_02_A11, Mouse strain C57BL/6J (56 days, male) 0.0

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