HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:29.0 nTPM
FANTOM5:60.8 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:31.7 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057160
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
2148 Female, age 91, left hemisphere 12.6
2621 Female, age 67, right hemisphere 12.3
2529 Female, age 94, left hemisphere 10.7
1855 Male, age 76, left hemisphere 10.0
1911 Female, age 85, right hemisphere 9.9
1898 Male, age 80, left hemisphere 9.7
Dentate gyrus
nTPM: 12.3
2531 Female, age 67, both hemispheres 14.4
2246 Female, age 85, both hemispheres 13.1
2528 Male, age 74, both hemispheres 12.6
2530 Female, age 94, left hemisphere 12.6
1927 Female, age 91, both hemispheres 11.1
2010 Male, age 76, both hemispheres 10.2
Entorhinal gyrus
nTPM: 12.9
2613 Female, age 94, left hemisphere 14.8
1787 Male, age 76, left hemisphere 13.4
2764 Male, age 80, right hemisphere 13.4
1938 Female, age 85, left hemisphere 12.3
2686 Male, age 75, right hemisphere 12.0
2117 Female, age 91, right hemisphere 11.5
Hippocampus, CA1
nTPM: 10.8
2045 Male, age 76, both hemispheres 12.6
2527 Male, age 74, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.8
2082 Female, age 91, right hemisphere 10.2
1873 Female, age 85, both hemispheres 9.5
Hippocampus, CA2
nTPM: 10.6
2437 Female, age 94, left hemisphere 11.4
1940 Female, age 85, left hemisphere 11.3
2113 Female, age 91, right hemisphere 11.0
2249 Male, age 74, both hemispheres 10.5
1963 Male, age 80, left hemisphere 10.0
1892 Male, age 76, both hemispheres 9.1
Hippocampus, CA3
nTPM: 12.7
2620 Female, age 94, left hemisphere 19.3
2861 Female, age 67, both hemispheres 17.3
2436 Male, age 74, both hemispheres 11.1
2137 Male, age 80, left hemisphere 10.6
1891 Female, age 85, both hemispheres 9.4
1867 Male, age 76, both hemispheres 8.2
Parahippocampal cortex
nTPM: 11.6
2622 Female, age 67, right hemisphere 14.8
2532 Female, age 72, left hemisphere 14.6
2693 Female, age 94, both hemispheres 12.3
2692 Male, age 74, both hemispheres 12.1
2245 Female, age 91, both hemispheres 12.0
2250 Female, age 67, right hemisphere 11.8
1850 Male, age 80, both hemispheres 11.2
1990 Female, age 91, right hemisphere 10.6
1933 Female, age 85, both hemispheres 8.6
2018 Male, age 76, both hemispheres 7.5
Perirhinal gyrus
nTPM: 11.2
1794 Male, age 80, right hemisphere 13.3
2848 Male, age 76, right hemisphere 11.5
2521 Female, age 94, right hemisphere 11.2
1841 Female, age 85, right hemisphere 10.1
1847 Female, age 91, left hemisphere 9.7
Subiculum
nTPM: 10.2
2619 Male, age 74, both hemispheres 12.1
2729 Female, age 91, right hemisphere 11.0
1977 Female, age 85, both hemispheres 10.9
2042 Male, age 76, both hemispheres 10.6
2438 Female, age 94, left hemisphere 8.5
1901 Male, age 80, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.0
Samples: 197

Max nTPM: 47.9
Min nTPM: 11.4
Std nTPM: 7.7
Median nTPM: 28.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 47.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 46.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 45.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 44.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 44.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 44.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 43.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 43.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 43.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 42.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.8
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 54.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 12.7
Sample B Female 11.7
Sample C Male 10.7
Sample D Male 8.2
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.7
Sample A Female 9.7
Sample B Female 7.7
Sample C Male 9.8
Sample D Male 8.8
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.0
Sample A Female 10.9
Sample B Female 9.8
Sample C Male 10.4
Sample D Male 9.0
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 16.1
Min nTPM: 8.6
Sample A Female 10.8
Sample B Female 8.6
Sample C Male 16.1
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 31.5
Min nTPM: 29.5
Sample A Male 30.5
Sample B Male 29.5
Sample C Female 31.5
Sample D Female 29.8
Hippocampal formation
nTPM: 31.7
Samples: 4

Max nTPM: 34.5
Min nTPM: 29.8
Sample A Male 34.5
Sample B Male 29.8
Sample C Female 31.3
Sample D Female 31.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
76081928 Antisense, RP_060626_01_A08, Mouse strain C57BL/6J (56 days, male) 2.0
71021168 Antisense, RP_050526_04_B11, Mouse strain C57BL/6J (56 days, male) 1.7
112644308 Antisense, RP_110421_01_B04, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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