COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:46.5 nTPM
HPA:17.7 nTPM
GTEx:46.5 nTPM
FANTOM5:14.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 17.7
overview
Male, age 54 		Colon sample 67
nTPM: 24.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 16.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 17.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 19
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 17.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 15
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 16.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 16.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 16
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 22.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 21
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 46.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 46.5
Samples: 373

Max nTPM: 223.7
Min nTPM: 21.4
Std nTPM: 16.1
Median nTPM: 43.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 223.7
GTEX-1JJEA-2526-SM-CY8HJ 60-69 years, male 93.3
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 85.7
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 83.9
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 83.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 83.3
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 82.5
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 80.6
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 79.9
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 78.3
GTEX-183WM-2526-SM-731BP 70-79 years, female 77.7
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Colon - Transverse
Average nTPM: 33.2
Samples: 406

Max nTPM: 66.6
Min nTPM: 16.3
Std nTPM: 8.3
Median nTPM: 31.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 66.6
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 61.4
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 58.4
GTEX-1PPGY-2826-SM-DTX9H 60-69 years, male 58.2
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 58.0
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 57.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 56.4
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 55.6
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 54.5
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 54.2
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 54.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 14.9
FF:10014-101C5 62,83,84 years, mixed 14.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.