HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:40.6 nTPM
HPA:40.6 nTPM
GTEx:17.1 nTPM
FANTOM5:173.2 Scaled Tags Per Million
Pig:91.3 nTPM
Mouse:69.1 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1855 Male, age 76, left hemisphere 44.1
1898 Male, age 80, left hemisphere 37.0
1911 Female, age 85, right hemisphere 36.8
2621 Female, age 67, right hemisphere 32.8
2148 Female, age 91, left hemisphere 26.6
2529 Female, age 94, left hemisphere 16.3
Dentate gyrus
nTPM: 28.6
1927 Female, age 91, both hemispheres 38.4
2010 Male, age 76, both hemispheres 37.7
2246 Female, age 85, both hemispheres 31.1
2531 Female, age 67, both hemispheres 25.9
2530 Female, age 94, left hemisphere 21.0
2528 Male, age 74, both hemispheres 17.4
Entorhinal gyrus
nTPM: 24.4
2613 Female, age 94, left hemisphere 36.6
1938 Female, age 85, left hemisphere 31.0
1787 Male, age 76, left hemisphere 27.3
2117 Female, age 91, right hemisphere 23.2
2764 Male, age 80, right hemisphere 15.2
2686 Male, age 75, right hemisphere 13.4
Hippocampus, CA1
nTPM: 40.6
2749 Male, age 80, left hemisphere 79.7
1873 Female, age 85, both hemispheres 38.9
2045 Male, age 76, both hemispheres 34.1
2082 Female, age 91, right hemisphere 26.8
2527 Male, age 74, both hemispheres 23.6
Hippocampus, CA2
nTPM: 28.1
1892 Male, age 76, both hemispheres 43.3
1963 Male, age 80, left hemisphere 38.6
2113 Female, age 91, right hemisphere 27.4
1940 Female, age 85, left hemisphere 21.0
2249 Male, age 74, both hemispheres 19.9
2437 Female, age 94, left hemisphere 18.4
Hippocampus, CA3
nTPM: 37.5
2137 Male, age 80, left hemisphere 83.2
1867 Male, age 76, both hemispheres 39.5
2620 Female, age 94, left hemisphere 30.3
1891 Female, age 85, both hemispheres 29.4
2861 Female, age 67, both hemispheres 24.8
2436 Male, age 74, both hemispheres 17.5
Parahippocampal cortex
nTPM: 20.8
2018 Male, age 76, both hemispheres 31.3
2245 Female, age 91, both hemispheres 28.2
1990 Female, age 91, right hemisphere 22.9
1850 Male, age 80, both hemispheres 22.8
2250 Female, age 67, right hemisphere 22.5
2693 Female, age 94, both hemispheres 22.5
1933 Female, age 85, both hemispheres 18.1
2692 Male, age 74, both hemispheres 16.3
2622 Female, age 67, right hemisphere 12.2
2532 Female, age 72, left hemisphere 11.8
Perirhinal gyrus
nTPM: 21.5
1847 Female, age 91, left hemisphere 30.3
2521 Female, age 94, right hemisphere 25.3
2848 Male, age 76, right hemisphere 18.1
1841 Female, age 85, right hemisphere 17.3
1794 Male, age 80, right hemisphere 16.3
Subiculum
nTPM: 27.6
1901 Male, age 80, both hemispheres 44.7
2042 Male, age 76, both hemispheres 36.3
1977 Female, age 85, both hemispheres 26.5
2729 Female, age 91, right hemisphere 25.0
2438 Female, age 94, left hemisphere 17.8
2619 Male, age 74, both hemispheres 15.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.1
Samples: 197

Max nTPM: 63.8
Min nTPM: 5.4
Std nTPM: 7.1
Median nTPM: 15.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 41.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 32.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 32.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 32.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 32.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 31.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 173.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 173.2
FF:10169-103B7 60 years, female 217.6
FF:10153-102I9 76 years, female 128.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 91.3
Samples: 4

Max nTPM: 113.7
Min nTPM: 73.1
Sample A Female 113.7
Sample B Female 98.7
Sample C Male 73.1
Sample D Male 79.7
Entorhinal cortex
nTPM: 34.6
Samples: 4

Max nTPM: 39.0
Min nTPM: 31.7
Sample A Female 34.1
Sample B Female 33.7
Sample C Male 31.7
Sample D Male 39.0
Subiculum
nTPM: 44.0
Samples: 4

Max nTPM: 64.3
Min nTPM: 29.8
Sample A Female 64.3
Sample B Female 39.3
Sample C Male 42.4
Sample D Male 29.8
Ventral hippocampus
nTPM: 69.4
Samples: 4

Max nTPM: 91.9
Min nTPM: 46.7
Sample A Female 82.2
Sample B Female 46.7
Sample C Male 56.7
Sample D Male 91.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.8
Samples: 4

Max nTPM: 40.2
Min nTPM: 32.2
Sample A Male 33.2
Sample B Male 32.2
Sample C Female 40.2
Sample D Female 37.4
Hippocampal formation
nTPM: 69.1
Samples: 4

Max nTPM: 86.3
Min nTPM: 55.2
Sample A Male 55.2
Sample B Male 77.6
Sample C Female 86.3
Sample D Female 57.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
70238931 Antisense, RP_050526_04_D07, Mouse strain C57BL/6J (56 days, male) 6.4

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