HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.0 nTPM
HPA:43.0 nTPM
GTEx:39.7 nTPM
FANTOM5:22.1 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:15.7 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055649
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.0
Sample id Sample description nTPM
Hippocampus
nTPM: 43.0
2529 Female, age 94, left hemisphere 44.5
1855 Male, age 76, left hemisphere 43.7
1911 Female, age 85, right hemisphere 43.6
1898 Male, age 80, left hemisphere 43.1
2148 Female, age 91, left hemisphere 41.8
2621 Female, age 67, right hemisphere 41.0
Dentate gyrus
nTPM: 42.2
2530 Female, age 94, left hemisphere 47.8
2010 Male, age 76, both hemispheres 44.9
2531 Female, age 67, both hemispheres 41.0
2246 Female, age 85, both hemispheres 40.8
1927 Female, age 91, both hemispheres 39.3
2528 Male, age 74, both hemispheres 39.3
Entorhinal gyrus
nTPM: 41.9
2686 Male, age 75, right hemisphere 46.0
2117 Female, age 91, right hemisphere 44.2
1787 Male, age 76, left hemisphere 42.0
1938 Female, age 85, left hemisphere 41.3
2764 Male, age 80, right hemisphere 39.0
2613 Female, age 94, left hemisphere 38.9
Hippocampus, CA1
nTPM: 41.1
1873 Female, age 85, both hemispheres 43.6
2045 Male, age 76, both hemispheres 41.8
2527 Male, age 74, both hemispheres 41.7
2082 Female, age 91, right hemisphere 40.9
2749 Male, age 80, left hemisphere 37.7
Hippocampus, CA2
nTPM: 41.6
1963 Male, age 80, left hemisphere 43.7
1892 Male, age 76, both hemispheres 42.4
2437 Female, age 94, left hemisphere 41.5
2113 Female, age 91, right hemisphere 41.3
2249 Male, age 74, both hemispheres 40.5
1940 Female, age 85, left hemisphere 40.2
Hippocampus, CA3
nTPM: 40.6
1891 Female, age 85, both hemispheres 44.5
2861 Female, age 67, both hemispheres 40.7
1867 Male, age 76, both hemispheres 40.4
2620 Female, age 94, left hemisphere 39.4
2137 Male, age 80, left hemisphere 39.2
2436 Male, age 74, both hemispheres 39.2
Parahippocampal cortex
nTPM: 41.0
2692 Male, age 74, both hemispheres 44.0
2018 Male, age 76, both hemispheres 43.8
1850 Male, age 80, both hemispheres 42.0
1933 Female, age 85, both hemispheres 41.2
1990 Female, age 91, right hemisphere 40.9
2532 Female, age 72, left hemisphere 40.9
2693 Female, age 94, both hemispheres 40.4
2622 Female, age 67, right hemisphere 39.5
2245 Female, age 91, both hemispheres 39.0
2250 Female, age 67, right hemisphere 38.0
Perirhinal gyrus
nTPM: 39.8
2848 Male, age 76, right hemisphere 42.3
1841 Female, age 85, right hemisphere 42.0
1794 Male, age 80, right hemisphere 39.6
1847 Female, age 91, left hemisphere 38.8
2521 Female, age 94, right hemisphere 36.6
Subiculum
nTPM: 42.5
2438 Female, age 94, left hemisphere 44.8
2042 Male, age 76, both hemispheres 43.3
1901 Male, age 80, both hemispheres 42.7
1977 Female, age 85, both hemispheres 42.3
2729 Female, age 91, right hemisphere 41.7
2619 Male, age 74, both hemispheres 40.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.7
Samples: 197

Max nTPM: 85.2
Min nTPM: 13.5
Std nTPM: 12.5
Median nTPM: 37.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 85.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 79.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 73.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 70.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 70.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 69.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 68.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 68.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 66.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 65.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 64.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.1
FF:10153-102I9 76 years, female 30.6
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.8
Sample A Female 12.6
Sample B Female 8.7
Sample C Male 11.7
Sample D Male 7.8
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.2
Min nTPM: 8.3
Sample A Female 8.4
Sample B Female 10.2
Sample C Male 9.9
Sample D Male 8.3
Subiculum
nTPM: 11.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.4
Sample A Female 14.7
Sample B Female 11.7
Sample C Male 10.6
Sample D Male 10.4
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.8
Sample A Female 9.9
Sample B Female 9.9
Sample C Male 13.9
Sample D Male 9.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.1
Sample A Male 14.7
Sample B Male 16.2
Sample C Female 18.7
Sample D Female 13.1
Hippocampal formation
nTPM: 15.7
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.4
Sample A Male 15.0
Sample B Male 16.1
Sample C Female 14.4
Sample D Female 17.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
68269066 Antisense, RP_041208_01_H05, Mouse strain C57BL/6J (56 days, male) 16.0

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