COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.3 nTPM
HPA:39.5 nTPM
GTEx:42.3 nTPM
FANTOM5:89.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA012759Antibody CAB026138
Endothelial cells MediumNot detected
Glandular cells MediumMedium
Peripheral nerve/ganglion Not detectedNot detected





COLON - HPA RNA-seqi
Average nTPM 39.5
overview
Male, age 54 		Colon sample 67
nTPM: 35.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 31.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 44.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 51.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 39.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 37.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 41.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 42
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 41.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 29.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 35.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 32.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 50.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 30.2
Samples: 373

Max nTPM: 81.5
Min nTPM: 14.0
Std nTPM: 10.8
Median nTPM: 27.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 81.5
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 76.9
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 68.4
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 68.2
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 63.6
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 62.4
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 61.1
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 58.6
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 58.5
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 58.3
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 57.1
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Colon - Transverse
Average nTPM: 42.3
Samples: 406

Max nTPM: 188.5
Min nTPM: 14.0
Std nTPM: 19.4
Median nTPM: 39.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 188.5
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 185.8
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 176.1
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 99.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 94.3
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 93.0
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 91.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 87.1
GTEX-14PK6-1726-SM-6871J 70-79 years, female 86.8
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 86.4
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 86.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 89.8
FF:10014-101C5 62,83,84 years, mixed 89.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.