HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1.7 nTPM
HPA:1.7 nTPM
GTEx:40.7 nTPM
FANTOM5:293.1 Scaled Tags Per Million
Pig:44.3 nTPM
Mouse:41.7 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1.7
2148 Female, age 91, left hemisphere 3.0
1911 Female, age 85, right hemisphere 2.7
1898 Male, age 80, left hemisphere 1.6
1855 Male, age 76, left hemisphere 1.1
2529 Female, age 94, left hemisphere 0.9
2621 Female, age 67, right hemisphere 0.8
Dentate gyrus
nTPM: 1.2
2530 Female, age 94, left hemisphere 3.7
2010 Male, age 76, both hemispheres 1.6
2528 Male, age 74, both hemispheres 0.9
2531 Female, age 67, both hemispheres 0.6
1927 Female, age 91, both hemispheres 0.3
2246 Female, age 85, both hemispheres 0.2
Entorhinal gyrus
nTPM: 1.0
2764 Male, age 80, right hemisphere 2.3
2117 Female, age 91, right hemisphere 1.8
2613 Female, age 94, left hemisphere 1.1
2686 Male, age 75, right hemisphere 0.6
1938 Female, age 85, left hemisphere 0.1
1787 Male, age 76, left hemisphere 0.0
Hippocampus, CA1
nTPM: 0.9
1873 Female, age 85, both hemispheres 1.8
2749 Male, age 80, left hemisphere 1.5
2045 Male, age 76, both hemispheres 1.0
2527 Male, age 74, both hemispheres 0.1
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 1.3
2249 Male, age 74, both hemispheres 3.9
1940 Female, age 85, left hemisphere 2.2
1963 Male, age 80, left hemisphere 0.8
2437 Female, age 94, left hemisphere 0.7
1892 Male, age 76, both hemispheres 0.5
2113 Female, age 91, right hemisphere 0.0
Hippocampus, CA3
nTPM: 0.8
2620 Female, age 94, left hemisphere 2.8
1867 Male, age 76, both hemispheres 1.0
2861 Female, age 67, both hemispheres 0.5
1891 Female, age 85, both hemispheres 0.2
2436 Male, age 74, both hemispheres 0.1
2137 Male, age 80, left hemisphere 0.0
Parahippocampal cortex
nTPM: 0.5
1990 Female, age 91, right hemisphere 2.1
2018 Male, age 76, both hemispheres 1.1
2622 Female, age 67, right hemisphere 0.9
2532 Female, age 72, left hemisphere 0.7
1933 Female, age 85, both hemispheres 0.5
2250 Female, age 67, right hemisphere 0.5
1850 Male, age 80, both hemispheres 0.0
2245 Female, age 91, both hemispheres 0.0
2692 Male, age 74, both hemispheres 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.1
2521 Female, age 94, right hemisphere 0.4
2848 Male, age 76, right hemisphere 0.2
1841 Female, age 85, right hemisphere 0.1
1794 Male, age 80, right hemisphere 0.0
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 1.6
1901 Male, age 80, both hemispheres 3.1
2729 Female, age 91, right hemisphere 2.8
2619 Male, age 74, both hemispheres 2.2
2042 Male, age 76, both hemispheres 1.5
1977 Female, age 85, both hemispheres 0.3
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.7
Samples: 197

Max nTPM: 96.4
Min nTPM: 7.4
Std nTPM: 15.7
Median nTPM: 39.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 96.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 90.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 89.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 83.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 80.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 79.2
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 76.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 75.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 73.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 73.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 68.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 293.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 293.1
FF:10153-102I9 76 years, female 302.6
FF:10169-103B7 60 years, female 283.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 55.8
Min nTPM: 36.3
Sample A Female 55.8
Sample B Female 45.0
Sample C Male 40.3
Sample D Male 36.3
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 49.5
Min nTPM: 30.3
Sample A Female 39.6
Sample B Female 38.5
Sample C Male 49.5
Sample D Male 30.3
Subiculum
nTPM: 39.0
Samples: 4

Max nTPM: 49.0
Min nTPM: 31.0
Sample A Female 49.0
Sample B Female 42.5
Sample C Male 33.6
Sample D Male 31.0
Ventral hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 52.2
Min nTPM: 35.2
Sample A Female 45.3
Sample B Female 41.1
Sample C Male 52.2
Sample D Male 35.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 43.0
Min nTPM: 33.2
Sample A Male 33.2
Sample B Male 34.8
Sample C Female 33.4
Sample D Female 43.0
Hippocampal formation
nTPM: 41.8
Samples: 4

Max nTPM: 45.8
Min nTPM: 33.1
Sample A Male 33.1
Sample B Male 43.5
Sample C Female 45.8
Sample D Female 44.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
70565593 Antisense, RP_050628_01_C09, Mouse strain C57BL/6J (56 days, male) 12.1
69736052 Antisense, RP_050503_04_A12, Mouse strain C57BL/6J (56 days, male) 3.2
75081205 Antisense, RP_060315_03_C10, Mouse strain C57BL/6J (56 days, male) 3.1
Hippocampal formation
Expression energy: 6.1
70565593 Antisense, RP_050628_01_C09, Mouse strain C57BL/6J (56 days, male) 12.1
69736052 Antisense, RP_050503_04_A12, Mouse strain C57BL/6J (56 days, male) 3.2
75081205 Antisense, RP_060315_03_C10, Mouse strain C57BL/6J (56 days, male) 3.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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