HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.1 nTPM
HPA:38.1 nTPM
GTEx:35.3 nTPM
FANTOM5:14.1 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:37.6 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050969
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.1
Sample id Sample description nTPM
Hippocampus
nTPM: 37.3
2529 Female, age 94, left hemisphere 39.1
1898 Male, age 80, left hemisphere 38.4
2148 Female, age 91, left hemisphere 37.8
1911 Female, age 85, right hemisphere 37.1
2621 Female, age 67, right hemisphere 35.9
1855 Male, age 76, left hemisphere 35.6
Dentate gyrus
nTPM: 36.8
2530 Female, age 94, left hemisphere 39.4
2528 Male, age 74, both hemispheres 37.0
1927 Female, age 91, both hemispheres 36.4
2246 Female, age 85, both hemispheres 36.1
2531 Female, age 67, both hemispheres 36.1
2010 Male, age 76, both hemispheres 35.7
Entorhinal gyrus
nTPM: 38.1
2117 Female, age 91, right hemisphere 39.2
1938 Female, age 85, left hemisphere 38.9
2764 Male, age 80, right hemisphere 38.3
1787 Male, age 76, left hemisphere 37.7
2686 Male, age 75, right hemisphere 37.6
2613 Female, age 94, left hemisphere 37.0
Hippocampus, CA1
nTPM: 36.4
2082 Female, age 91, right hemisphere 37.0
2527 Male, age 74, both hemispheres 36.6
2749 Male, age 80, left hemisphere 36.5
1873 Female, age 85, both hemispheres 36.2
2045 Male, age 76, both hemispheres 35.7
Hippocampus, CA2
nTPM: 37.2
1963 Male, age 80, left hemisphere 38.0
1940 Female, age 85, left hemisphere 37.5
2113 Female, age 91, right hemisphere 37.5
2437 Female, age 94, left hemisphere 37.0
1892 Male, age 76, both hemispheres 36.6
2249 Male, age 74, both hemispheres 36.6
Hippocampus, CA3
nTPM: 37.1
2861 Female, age 67, both hemispheres 38.2
2137 Male, age 80, left hemisphere 37.8
1891 Female, age 85, both hemispheres 37.4
1867 Male, age 76, both hemispheres 37.3
2620 Female, age 94, left hemisphere 36.1
2436 Male, age 74, both hemispheres 35.6
Parahippocampal cortex
nTPM: 36.9
1850 Male, age 80, both hemispheres 37.8
1933 Female, age 85, both hemispheres 37.5
1990 Female, age 91, right hemisphere 37.4
2692 Male, age 74, both hemispheres 37.3
2532 Female, age 72, left hemisphere 37.0
2245 Female, age 91, both hemispheres 36.8
2622 Female, age 67, right hemisphere 36.8
2693 Female, age 94, both hemispheres 36.6
2250 Female, age 67, right hemisphere 35.8
2018 Male, age 76, both hemispheres 35.6
Perirhinal gyrus
nTPM: 37.4
1794 Male, age 80, right hemisphere 38.7
2848 Male, age 76, right hemisphere 38.0
1847 Female, age 91, left hemisphere 37.1
1841 Female, age 85, right hemisphere 36.8
2521 Female, age 94, right hemisphere 36.4
Subiculum
nTPM: 37.1
1901 Male, age 80, both hemispheres 37.8
1977 Female, age 85, both hemispheres 37.7
2729 Female, age 91, right hemisphere 37.4
2619 Male, age 74, both hemispheres 36.9
2438 Female, age 94, left hemisphere 36.8
2042 Male, age 76, both hemispheres 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 197

Max nTPM: 62.6
Min nTPM: 18.4
Std nTPM: 8.4
Median nTPM: 34.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 62.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 58.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 57.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 57.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 57.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 54.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 54.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 53.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.1
FF:10153-102I9 76 years, female 14.7
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 21.3
Min nTPM: 11.6
Sample A Female 21.3
Sample B Female 17.3
Sample C Male 16.0
Sample D Male 11.6
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 24.0
Min nTPM: 14.6
Sample A Female 17.6
Sample B Female 16.9
Sample C Male 24.0
Sample D Male 14.6
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 23.9
Min nTPM: 14.2
Sample A Female 23.9
Sample B Female 15.5
Sample C Male 16.8
Sample D Male 14.2
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 22.7
Min nTPM: 13.0
Sample A Female 16.7
Sample B Female 13.0
Sample C Male 22.7
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.0
Samples: 4

Max nTPM: 36.4
Min nTPM: 32.7
Sample A Male 32.7
Sample B Male 34.2
Sample C Female 36.4
Sample D Female 32.7
Hippocampal formation
nTPM: 37.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 35.1
Sample A Male 40.3
Sample B Male 35.1
Sample C Female 36.4
Sample D Female 38.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
293666 Antisense, RP_040604_02_H05, Mouse strain C57BL/6J (56 days, male) 11.9
74357606 Antisense, RP_060119_03_A08, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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