HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:33.7 nTPM
HPA:33.7 nTPM
GTEx:94.1 nTPM
FANTOM5:47.4 Scaled Tags Per Million
Pig:37.3 nTPM
Mouse:20.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055904
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
2529 Female, age 94, left hemisphere 40.2
1898 Male, age 80, left hemisphere 39.4
2621 Female, age 67, right hemisphere 29.7
2148 Female, age 91, left hemisphere 26.4
1855 Male, age 76, left hemisphere 21.7
1911 Female, age 85, right hemisphere 21.0
Dentate gyrus
nTPM: 33.7
2530 Female, age 94, left hemisphere 57.1
2531 Female, age 67, both hemispheres 33.6
1927 Female, age 91, both hemispheres 33.2
2528 Male, age 74, both hemispheres 29.6
2010 Male, age 76, both hemispheres 24.9
2246 Female, age 85, both hemispheres 23.7
Entorhinal gyrus
nTPM: 29.1
2764 Male, age 80, right hemisphere 37.9
2613 Female, age 94, left hemisphere 34.0
1787 Male, age 76, left hemisphere 29.6
1938 Female, age 85, left hemisphere 28.6
2117 Female, age 91, right hemisphere 24.8
2686 Male, age 75, right hemisphere 19.5
Hippocampus, CA1
nTPM: 28.6
2749 Male, age 80, left hemisphere 55.4
2527 Male, age 74, both hemispheres 33.8
2045 Male, age 76, both hemispheres 20.3
1873 Female, age 85, both hemispheres 19.3
2082 Female, age 91, right hemisphere 14.2
Hippocampus, CA2
nTPM: 30.0
1963 Male, age 80, left hemisphere 40.9
2437 Female, age 94, left hemisphere 35.9
1892 Male, age 76, both hemispheres 31.3
2249 Male, age 74, both hemispheres 28.0
2113 Female, age 91, right hemisphere 24.8
1940 Female, age 85, left hemisphere 18.9
Hippocampus, CA3
nTPM: 27.7
2861 Female, age 67, both hemispheres 40.9
2137 Male, age 80, left hemisphere 35.8
2620 Female, age 94, left hemisphere 27.7
1867 Male, age 76, both hemispheres 25.6
2436 Male, age 74, both hemispheres 19.1
1891 Female, age 85, both hemispheres 17.1
Parahippocampal cortex
nTPM: 26.4
2250 Female, age 67, right hemisphere 35.5
2245 Female, age 91, both hemispheres 34.5
1990 Female, age 91, right hemisphere 30.0
1933 Female, age 85, both hemispheres 28.9
2018 Male, age 76, both hemispheres 28.1
2532 Female, age 72, left hemisphere 25.1
2622 Female, age 67, right hemisphere 24.8
1850 Male, age 80, both hemispheres 22.3
2692 Male, age 74, both hemispheres 17.6
2693 Female, age 94, both hemispheres 17.5
Perirhinal gyrus
nTPM: 28.6
2521 Female, age 94, right hemisphere 33.6
1794 Male, age 80, right hemisphere 33.5
1847 Female, age 91, left hemisphere 33.3
1841 Female, age 85, right hemisphere 23.8
2848 Male, age 76, right hemisphere 18.7
Subiculum
nTPM: 20.6
1977 Female, age 85, both hemispheres 29.2
1901 Male, age 80, both hemispheres 26.3
2619 Male, age 74, both hemispheres 21.9
2729 Female, age 91, right hemisphere 18.1
2042 Male, age 76, both hemispheres 17.2
2438 Female, age 94, left hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.1
Samples: 197

Max nTPM: 306.7
Min nTPM: 4.7
Std nTPM: 54.8
Median nTPM: 78.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 306.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 283.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 281.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 247.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 242.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 237.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 218.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 210.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 209.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 198.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 191.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.4
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 38.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 58.0
Min nTPM: 18.4
Sample A Female 58.0
Sample B Female 34.8
Sample C Male 28.0
Sample D Male 18.4
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 57.1
Min nTPM: 20.3
Sample A Female 24.7
Sample B Female 57.1
Sample C Male 47.1
Sample D Male 20.3
Subiculum
nTPM: 28.7
Samples: 4

Max nTPM: 45.1
Min nTPM: 16.6
Sample A Female 45.1
Sample B Female 29.5
Sample C Male 16.6
Sample D Male 23.5
Ventral hippocampus
nTPM: 31.1
Samples: 4

Max nTPM: 44.1
Min nTPM: 20.5
Sample A Female 44.1
Sample B Female 25.4
Sample C Male 34.4
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 14.1
Sample A Male 18.6
Sample B Male 20.1
Sample C Female 17.3
Sample D Female 14.1
Hippocampal formation
nTPM: 20.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.4
Sample A Male 19.6
Sample B Male 18.4
Sample C Female 21.3
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74635144 Antisense, RP_060215_03_D09, Mouse strain C57BL/6J (56 days, male) 0.0

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