HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.7 nTPM
HPA:37.7 nTPM
GTEx:78.6 nTPM
FANTOM5:52.4 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:58.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007039
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.7
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
2621 Female, age 67, right hemisphere 69.8
2529 Female, age 94, left hemisphere 51.2
2148 Female, age 91, left hemisphere 33.2
1911 Female, age 85, right hemisphere 32.5
1898 Male, age 80, left hemisphere 20.9
1855 Male, age 76, left hemisphere 18.3
Dentate gyrus
nTPM: 24.7
2531 Female, age 67, both hemispheres 49.5
1927 Female, age 91, both hemispheres 42.5
2530 Female, age 94, left hemisphere 25.6
2528 Male, age 74, both hemispheres 13.1
2010 Male, age 76, both hemispheres 12.3
2246 Female, age 85, both hemispheres 5.1
Entorhinal gyrus
nTPM: 24.6
2613 Female, age 94, left hemisphere 49.1
2686 Male, age 75, right hemisphere 33.2
2764 Male, age 80, right hemisphere 21.9
1787 Male, age 76, left hemisphere 17.6
1938 Female, age 85, left hemisphere 16.3
2117 Female, age 91, right hemisphere 9.6
Hippocampus, CA1
nTPM: 21.0
2749 Male, age 80, left hemisphere 38.9
2527 Male, age 74, both hemispheres 35.2
1873 Female, age 85, both hemispheres 19.8
2082 Female, age 91, right hemisphere 6.5
2045 Male, age 76, both hemispheres 4.9
Hippocampus, CA2
nTPM: 25.1
1963 Male, age 80, left hemisphere 74.1
2437 Female, age 94, left hemisphere 22.5
2113 Female, age 91, right hemisphere 21.1
1892 Male, age 76, both hemispheres 15.1
2249 Male, age 74, both hemispheres 9.9
1940 Female, age 85, left hemisphere 7.9
Hippocampus, CA3
nTPM: 30.1
2861 Female, age 67, both hemispheres 73.2
2137 Male, age 80, left hemisphere 41.7
2620 Female, age 94, left hemisphere 34.1
1867 Male, age 76, both hemispheres 18.1
1891 Female, age 85, both hemispheres 10.0
2436 Male, age 74, both hemispheres 3.3
Parahippocampal cortex
nTPM: 21.0
2245 Female, age 91, both hemispheres 45.8
2622 Female, age 67, right hemisphere 40.4
2250 Female, age 67, right hemisphere 24.4
2693 Female, age 94, both hemispheres 20.6
1933 Female, age 85, both hemispheres 16.0
1990 Female, age 91, right hemisphere 14.8
2018 Male, age 76, both hemispheres 14.6
2532 Female, age 72, left hemisphere 12.7
2692 Male, age 74, both hemispheres 10.9
1850 Male, age 80, both hemispheres 9.7
Perirhinal gyrus
nTPM: 17.5
2521 Female, age 94, right hemisphere 24.4
1847 Female, age 91, left hemisphere 23.0
1794 Male, age 80, right hemisphere 18.8
1841 Female, age 85, right hemisphere 11.9
2848 Male, age 76, right hemisphere 9.5
Subiculum
nTPM: 10.3
2619 Male, age 74, both hemispheres 16.9
2729 Female, age 91, right hemisphere 14.8
1901 Male, age 80, both hemispheres 11.4
2042 Male, age 76, both hemispheres 10.0
1977 Female, age 85, both hemispheres 8.9
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.6
Samples: 197

Max nTPM: 315.0
Min nTPM: 11.9
Std nTPM: 48.2
Median nTPM: 69.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 315.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 273.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 210.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 204.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 203.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 201.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 200.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 195.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 183.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 178.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 177.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.4
FF:10153-102I9 76 years, female 67.2
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 14.3
Sample A Female 22.4
Sample B Female 19.7
Sample C Male 19.8
Sample D Male 14.3
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 36.1
Min nTPM: 21.9
Sample A Female 25.0
Sample B Female 26.0
Sample C Male 36.1
Sample D Male 21.9
Subiculum
nTPM: 19.6
Samples: 4

Max nTPM: 26.2
Min nTPM: 15.8
Sample A Female 26.2
Sample B Female 17.8
Sample C Male 18.5
Sample D Male 15.8
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 23.0
Min nTPM: 14.0
Sample A Female 15.1
Sample B Female 14.0
Sample C Male 23.0
Sample D Male 22.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 63.5
Min nTPM: 52.7
Sample A Male 59.9
Sample B Male 63.5
Sample C Female 52.7
Sample D Female 57.9
Hippocampal formation
nTPM: 49.7
Samples: 4

Max nTPM: 53.9
Min nTPM: 45.5
Sample A Male 49.4
Sample B Male 50.1
Sample C Female 45.5
Sample D Female 53.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71212596 Antisense, RP_050816_03_E05, Mouse strain C57BL/6J (56 days, male) 0.4
74003377 Antisense, RP_051019_03_A01, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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