HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:100.0 nTPM
HPA:100.0 nTPM
GTEx:335.3 nTPM
FANTOM5:614.4 Scaled Tags Per Million
Pig:145.7 nTPM
Mouse:658.1 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027999
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.0
Sample id Sample description nTPM
Hippocampus
nTPM: 94.8
1898 Male, age 80, left hemisphere 97.2
2621 Female, age 67, right hemisphere 96.6
1855 Male, age 76, left hemisphere 94.7
2529 Female, age 94, left hemisphere 94.6
2148 Female, age 91, left hemisphere 93.4
1911 Female, age 85, right hemisphere 92.1
Dentate gyrus
nTPM: 94.6
2246 Female, age 85, both hemispheres 97.0
1927 Female, age 91, both hemispheres 95.8
2531 Female, age 67, both hemispheres 94.9
2530 Female, age 94, left hemisphere 94.8
2010 Male, age 76, both hemispheres 94.7
2528 Male, age 74, both hemispheres 90.7
Entorhinal gyrus
nTPM: 95.2
2764 Male, age 80, right hemisphere 96.9
2613 Female, age 94, left hemisphere 96.1
1787 Male, age 76, left hemisphere 96.0
1938 Female, age 85, left hemisphere 95.3
2686 Male, age 75, right hemisphere 95.2
2117 Female, age 91, right hemisphere 91.7
Hippocampus, CA1
nTPM: 96.8
2749 Male, age 80, left hemisphere 106.4
2045 Male, age 76, both hemispheres 96.0
1873 Female, age 85, both hemispheres 95.9
2527 Male, age 74, both hemispheres 94.6
2082 Female, age 91, right hemisphere 91.3
Hippocampus, CA2
nTPM: 94.7
1892 Male, age 76, both hemispheres 102.7
1963 Male, age 80, left hemisphere 96.6
2437 Female, age 94, left hemisphere 94.0
1940 Female, age 85, left hemisphere 93.2
2249 Male, age 74, both hemispheres 91.3
2113 Female, age 91, right hemisphere 90.5
Hippocampus, CA3
nTPM: 95.3
1867 Male, age 76, both hemispheres 97.1
2137 Male, age 80, left hemisphere 96.8
2436 Male, age 74, both hemispheres 95.7
1891 Female, age 85, both hemispheres 94.9
2861 Female, age 67, both hemispheres 93.7
2620 Female, age 94, left hemisphere 93.5
Parahippocampal cortex
nTPM: 96.5
2245 Female, age 91, both hemispheres 102.7
2532 Female, age 72, left hemisphere 98.7
1850 Male, age 80, both hemispheres 98.5
1933 Female, age 85, both hemispheres 98.5
1990 Female, age 91, right hemisphere 95.6
2018 Male, age 76, both hemispheres 95.3
2250 Female, age 67, right hemisphere 94.9
2622 Female, age 67, right hemisphere 94.7
2693 Female, age 94, both hemispheres 94.4
2692 Male, age 74, both hemispheres 92.0
Perirhinal gyrus
nTPM: 100.0
1847 Female, age 91, left hemisphere 103.5
1794 Male, age 80, right hemisphere 101.2
1841 Female, age 85, right hemisphere 99.9
2521 Female, age 94, right hemisphere 98.8
2848 Male, age 76, right hemisphere 96.6
Subiculum
nTPM: 94.0
2438 Female, age 94, left hemisphere 97.7
1977 Female, age 85, both hemispheres 97.4
1901 Male, age 80, both hemispheres 96.7
2619 Male, age 74, both hemispheres 92.2
2042 Male, age 76, both hemispheres 91.2
2729 Female, age 91, right hemisphere 88.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 335.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 335.3
Samples: 197

Max nTPM: 965.8
Min nTPM: 113.0
Std nTPM: 132.6
Median nTPM: 317.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 965.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 709.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 709.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 662.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 657.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 638.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 631.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 610.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 600.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 582.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 572.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 614.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 614.4
FF:10169-103B7 60 years, female 840.2
FF:10153-102I9 76 years, female 388.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 145.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 145.7
Samples: 4

Max nTPM: 194.0
Min nTPM: 102.3
Sample A Female 194.0
Sample B Female 131.6
Sample C Male 154.7
Sample D Male 102.3
Entorhinal cortex
nTPM: 142.1
Samples: 4

Max nTPM: 176.8
Min nTPM: 103.6
Sample A Female 137.2
Sample B Female 176.8
Sample C Male 150.7
Sample D Male 103.6
Subiculum
nTPM: 131.3
Samples: 4

Max nTPM: 194.0
Min nTPM: 105.1
Sample A Female 194.0
Sample B Female 114.1
Sample C Male 105.1
Sample D Male 112.0
Ventral hippocampus
nTPM: 133.5
Samples: 4

Max nTPM: 158.5
Min nTPM: 97.1
Sample A Female 158.5
Sample B Female 97.1
Sample C Male 152.0
Sample D Male 126.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 658.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 658.1
Samples: 4

Max nTPM: 691.3
Min nTPM: 622.8
Sample A Male 622.8
Sample B Male 691.3
Sample C Female 667.6
Sample D Female 650.8
Hippocampal formation
nTPM: 547.8
Samples: 4

Max nTPM: 672.6
Min nTPM: 486.3
Sample A Male 672.6
Sample B Male 502.3
Sample C Female 486.3
Sample D Female 529.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
75774682 Antisense, RP_060530_01_D07, Mouse strain C57BL/6J (56 days, male) 14.5
67978746 Antisense, RP_040923_01_G06, Mouse strain C57BL/6J (56 days, male) 10.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.