HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:231.8 nTPM
HPA:231.8 nTPM
GTEx:231.3 nTPM
FANTOM5:271.6 Scaled Tags Per Million
Pig:51.1 nTPM
Mouse:581.7 nTPM
Allen mouse:22.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029196Antibody CAB009528Antibody CAB018699
Glial cells Not detectedNot detectedLow
Neuronal cells HighNot detectedHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 231.8
Sample id Sample description nTPM
Hippocampus
nTPM: 199.7
1898 Male, age 80, left hemisphere 229.8
2621 Female, age 67, right hemisphere 204.4
1855 Male, age 76, left hemisphere 200.5
2529 Female, age 94, left hemisphere 193.0
1911 Female, age 85, right hemisphere 187.6
2148 Female, age 91, left hemisphere 182.7
Dentate gyrus
nTPM: 201.0
1927 Female, age 91, both hemispheres 214.0
2010 Male, age 76, both hemispheres 212.1
2530 Female, age 94, left hemisphere 205.9
2246 Female, age 85, both hemispheres 198.5
2528 Male, age 74, both hemispheres 196.1
2531 Female, age 67, both hemispheres 179.3
Entorhinal gyrus
nTPM: 200.5
2764 Male, age 80, right hemisphere 222.9
1938 Female, age 85, left hemisphere 214.6
1787 Male, age 76, left hemisphere 202.0
2613 Female, age 94, left hemisphere 198.1
2117 Female, age 91, right hemisphere 185.5
2686 Male, age 75, right hemisphere 180.2
Hippocampus, CA1
nTPM: 214.0
2749 Male, age 80, left hemisphere 271.1
1873 Female, age 85, both hemispheres 211.8
2527 Male, age 74, both hemispheres 201.9
2045 Male, age 76, both hemispheres 194.1
2082 Female, age 91, right hemisphere 190.9
Hippocampus, CA2
nTPM: 209.2
1892 Male, age 76, both hemispheres 234.2
1963 Male, age 80, left hemisphere 225.1
2249 Male, age 74, both hemispheres 210.6
1940 Female, age 85, left hemisphere 201.5
2437 Female, age 94, left hemisphere 195.8
2113 Female, age 91, right hemisphere 187.8
Hippocampus, CA3
nTPM: 204.5
2137 Male, age 80, left hemisphere 240.9
2436 Male, age 74, both hemispheres 216.2
1867 Male, age 76, both hemispheres 212.3
1891 Female, age 85, both hemispheres 195.8
2620 Female, age 94, left hemisphere 190.9
2861 Female, age 67, both hemispheres 171.2
Parahippocampal cortex
nTPM: 202.2
1850 Male, age 80, both hemispheres 238.2
1933 Female, age 85, both hemispheres 209.6
1990 Female, age 91, right hemisphere 209.0
2532 Female, age 72, left hemisphere 206.1
2245 Female, age 91, both hemispheres 204.1
2250 Female, age 67, right hemisphere 202.7
2018 Male, age 76, both hemispheres 201.1
2693 Female, age 94, both hemispheres 192.2
2692 Male, age 74, both hemispheres 184.3
2622 Female, age 67, right hemisphere 174.2
Perirhinal gyrus
nTPM: 231.8
1794 Male, age 80, right hemisphere 246.7
1847 Female, age 91, left hemisphere 246.5
1841 Female, age 85, right hemisphere 236.6
2521 Female, age 94, right hemisphere 218.9
2848 Male, age 76, right hemisphere 210.2
Subiculum
nTPM: 195.3
1901 Male, age 80, both hemispheres 214.1
1977 Female, age 85, both hemispheres 210.2
2438 Female, age 94, left hemisphere 193.4
2042 Male, age 76, both hemispheres 189.9
2619 Male, age 74, both hemispheres 189.1
2729 Female, age 91, right hemisphere 174.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 231.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 231.3
Samples: 197

Max nTPM: 508.4
Min nTPM: 112.1
Std nTPM: 84.0
Median nTPM: 210.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 508.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 479.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 460.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 449.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 441.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 426.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 405.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 392.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 384.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 380.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 377.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 271.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 271.6
FF:10169-103B7 60 years, female 395.5
FF:10153-102I9 76 years, female 147.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 58.4
Min nTPM: 38.2
Sample A Female 58.4
Sample B Female 48.2
Sample C Male 46.3
Sample D Male 38.2
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 57.7
Min nTPM: 46.1
Sample A Female 52.4
Sample B Female 57.7
Sample C Male 48.4
Sample D Male 46.1
Subiculum
nTPM: 46.9
Samples: 4

Max nTPM: 62.2
Min nTPM: 39.7
Sample A Female 62.2
Sample B Female 43.8
Sample C Male 39.7
Sample D Male 42.0
Ventral hippocampus
nTPM: 43.2
Samples: 4

Max nTPM: 49.5
Min nTPM: 33.8
Sample A Female 49.5
Sample B Female 33.8
Sample C Male 43.6
Sample D Male 45.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 581.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 581.3
Samples: 4

Max nTPM: 614.0
Min nTPM: 550.6
Sample A Male 550.6
Sample B Male 614.0
Sample C Female 590.7
Sample D Female 569.8
Hippocampal formation
nTPM: 581.8
Samples: 4

Max nTPM: 667.0
Min nTPM: 546.3
Sample A Male 667.0
Sample B Male 546.3
Sample C Female 549.9
Sample D Female 563.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.4
655501 Antisense, RP_040922_01_C02, Mouse strain C57BL/6J (56 days, male) 25.7
67979021 Antisense, RP_040923_02_A01, Mouse strain C57BL/6J (56 days, male) 19.0

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