AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:92.9 nTPM
HPA:92.9 nTPM
GTEx:67.5 nTPM
FANTOM5:119.6 Scaled Tags Per Million
Pig:48.5 nTPM
Mouse:88.5 nTPM
Allen mouse:2.7 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 92.9
Sample id Sample description nTPM
Amygdala
nTPM: 92.9
2514 Male, age 75, right hemisphere 97.5
2814 Male, age 76, right hemisphere 95.6
1987 Female, age 91, left hemisphere 95.3
2695 Female, age 67, right hemisphere 90.3
2517 Female, age 94, left hemisphere 85.9
Basal amygdala
nTPM: 85.5
2609 Male, age 75, right hemisphere 91.8
2110 Male, age 80, left hemisphere 89.4
1955 Male, age 76, both hemispheres 88.6
2243 Female, age 91, right hemisphere 87.6
2685 Female, age 94, left hemisphere 82.8
2827 Female, age 67, right hemisphere 72.7
Central amygdala
nTPM: 86.5
1905 Male, age 76, both hemispheres 91.7
2515 Male, age 75, right hemisphere 88.7
2701 Female, age 91, right hemisphere 86.1
2239 Male, age 80, left hemisphere 85.6
2826 Female, age 94, left hemisphere 80.4
Corticomedial amygdala
nTPM: 88.7
2428 Male, age 75, right hemisphere 94.4
2240 Male, age 76, both hemispheres 92.6
2829 Male, age 80, left hemisphere 91.8
2429 Female, age 94, left hemisphere 90.9
2242 Female, age 91, right hemisphere 88.4
2535 Female, age 67, right hemisphere 73.9
Lateral amygdala
nTPM: 84.4
1883 Male, age 76, both hemispheres 94.3
2516 Male, age 75, right hemisphere 90.2
2534 Female, age 94, left hemisphere 83.3
2256 Male, age 80, left hemisphere 83.1
2255 Female, age 91, right hemisphere 82.7
2830 Female, age 67, right hemisphere 73.1
Stria terminalis, bed nucleus
nTPM: 91.1
1974 Female, age 91, both hemispheres 96.6
2486 Female, age 94, both hemispheres 89.5
2201 Male, age 74, unknown 87.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 67.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 67.5
Samples: 152

Max nTPM: 119.2
Min nTPM: 31.9
Std nTPM: 14.8
Median nTPM: 68.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 119.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 110.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 103.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 100.2
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 99.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 97.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 94.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 92.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 92.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 92.2
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 90.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 119.6
FF:10151-102I7 76 years, female 119.6

AMYGDALA - Pig RNA-seqi
Average nTPM 48.5
Pig sample Sample description nTPM
Amygdala
nTPM: 48.5
Samples: 4

Max nTPM: 61.5
Min nTPM: 42.7
Sample A Female 61.5
Sample B Female 46.5
Sample C Male 43.1
Sample D Male 42.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 88.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 88.5
Samples: 4

Max nTPM: 91.3
Min nTPM: 87.3
Sample A Male 88.0
Sample B Male 87.3
Sample C Female 91.3
Sample D Female 87.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.7
69817264 Antisense, RP_050510_03_A01, Mouse strain C57BL/6J (56 days, male) 5.4
70919041 Antisense, RP_050712_04_A08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.