HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.4 nTPM
HPA:13.4 nTPM
GTEx:14.0 nTPM
FANTOM5:39.0 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:21.1 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044878
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
2529 Female, age 94, left hemisphere 12.3
1898 Male, age 80, left hemisphere 11.4
2621 Female, age 67, right hemisphere 11.1
2148 Female, age 91, left hemisphere 10.1
1855 Male, age 76, left hemisphere 9.9
1911 Female, age 85, right hemisphere 8.1
Dentate gyrus
nTPM: 10.0
2531 Female, age 67, both hemispheres 10.6
2530 Female, age 94, left hemisphere 10.4
2010 Male, age 76, both hemispheres 10.2
1927 Female, age 91, both hemispheres 9.7
2246 Female, age 85, both hemispheres 9.6
2528 Male, age 74, both hemispheres 9.4
Entorhinal gyrus
nTPM: 12.3
2764 Male, age 80, right hemisphere 14.3
1787 Male, age 76, left hemisphere 12.5
1938 Female, age 85, left hemisphere 12.1
2613 Female, age 94, left hemisphere 12.1
2686 Male, age 75, right hemisphere 11.9
2117 Female, age 91, right hemisphere 11.0
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 12.7
2527 Male, age 74, both hemispheres 10.8
1873 Female, age 85, both hemispheres 10.3
2082 Female, age 91, right hemisphere 9.4
2045 Male, age 76, both hemispheres 9.1
Hippocampus, CA2
nTPM: 9.7
1963 Male, age 80, left hemisphere 11.9
2437 Female, age 94, left hemisphere 11.1
1892 Male, age 76, both hemispheres 10.5
2113 Female, age 91, right hemisphere 9.8
1940 Female, age 85, left hemisphere 7.8
2249 Male, age 74, both hemispheres 7.1
Hippocampus, CA3
nTPM: 10.0
2861 Female, age 67, both hemispheres 11.8
2137 Male, age 80, left hemisphere 11.7
2620 Female, age 94, left hemisphere 10.6
1891 Female, age 85, both hemispheres 10.2
1867 Male, age 76, both hemispheres 9.9
2436 Male, age 74, both hemispheres 5.9
Parahippocampal cortex
nTPM: 10.8
1850 Male, age 80, both hemispheres 13.4
2532 Female, age 72, left hemisphere 12.1
2692 Male, age 74, both hemispheres 11.6
1933 Female, age 85, both hemispheres 10.9
1990 Female, age 91, right hemisphere 10.9
2622 Female, age 67, right hemisphere 10.4
2245 Female, age 91, both hemispheres 10.2
2693 Female, age 94, both hemispheres 10.1
2018 Male, age 76, both hemispheres 9.7
2250 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 13.4
1794 Male, age 80, right hemisphere 15.9
1847 Female, age 91, left hemisphere 13.6
2521 Female, age 94, right hemisphere 12.9
1841 Female, age 85, right hemisphere 12.6
2848 Male, age 76, right hemisphere 12.1
Subiculum
nTPM: 10.7
2438 Female, age 94, left hemisphere 12.0
1977 Female, age 85, both hemispheres 11.9
1901 Male, age 80, both hemispheres 10.7
2619 Male, age 74, both hemispheres 10.5
2042 Male, age 76, both hemispheres 9.7
2729 Female, age 91, right hemisphere 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 27.6
Min nTPM: 8.7
Std nTPM: 2.7
Median nTPM: 13.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 27.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 26.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 20.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 20.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 19.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 19.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 18.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 18.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.0
FF:10153-102I9 76 years, female 40.5
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 16.7
Min nTPM: 12.7
Sample A Female 16.7
Sample B Female 15.4
Sample C Male 14.4
Sample D Male 12.7
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.1
Sample A Female 13.6
Sample B Female 13.5
Sample C Male 14.2
Sample D Male 12.1
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.9
Sample A Female 17.1
Sample B Female 13.6
Sample C Male 12.9
Sample D Male 11.9
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.3
Sample A Female 13.1
Sample B Female 11.3
Sample C Male 16.0
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 22.2
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 20.7
Sample C Female 21.0
Sample D Female 22.2
Hippocampal formation
nTPM: 20.4
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.5
Sample A Male 19.8
Sample B Male 20.9
Sample C Female 22.5
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
69173226 Antisense, RP_050329_01_B11, Mouse strain C57BL/6J (56 days, male) 8.6
81600098 Antisense, RP_080110_03_D11, Mouse strain C57BL/6J (56 days, male) 8.4

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The Human Protein Atlas

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