HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.0 nTPM
HPA:12.0 nTPM
GTEx:16.9 nTPM
FANTOM5:18.6 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:21.0 nTPM
Allen mouse:16.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045622Antibody HPA048499
Glial cells LowNot detected
Neuronal cells HighMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.0
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
1898 Male, age 80, left hemisphere 12.0
1855 Male, age 76, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.5
1911 Female, age 85, right hemisphere 11.0
2529 Female, age 94, left hemisphere 11.0
2148 Female, age 91, left hemisphere 10.1
Dentate gyrus
nTPM: 11.1
2010 Male, age 76, both hemispheres 13.1
2246 Female, age 85, both hemispheres 12.0
1927 Female, age 91, both hemispheres 11.8
2531 Female, age 67, both hemispheres 10.6
2528 Male, age 74, both hemispheres 9.7
2530 Female, age 94, left hemisphere 9.6
Entorhinal gyrus
nTPM: 10.8
2613 Female, age 94, left hemisphere 12.0
1787 Male, age 76, left hemisphere 11.3
1938 Female, age 85, left hemisphere 10.9
2686 Male, age 75, right hemisphere 10.5
2117 Female, age 91, right hemisphere 10.2
2764 Male, age 80, right hemisphere 10.1
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 15.4
1873 Female, age 85, both hemispheres 12.9
2527 Male, age 74, both hemispheres 11.2
2045 Male, age 76, both hemispheres 11.0
2082 Female, age 91, right hemisphere 9.7
Hippocampus, CA2
nTPM: 11.2
1892 Male, age 76, both hemispheres 13.6
1963 Male, age 80, left hemisphere 12.0
1940 Female, age 85, left hemisphere 10.7
2249 Male, age 74, both hemispheres 10.7
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 10.0
Hippocampus, CA3
nTPM: 11.8
2137 Male, age 80, left hemisphere 15.2
2436 Male, age 74, both hemispheres 12.7
1867 Male, age 76, both hemispheres 12.5
2620 Female, age 94, left hemisphere 10.9
1891 Female, age 85, both hemispheres 10.6
2861 Female, age 67, both hemispheres 9.2
Parahippocampal cortex
nTPM: 11.0
1933 Female, age 85, both hemispheres 12.7
2018 Male, age 76, both hemispheres 12.0
1850 Male, age 80, both hemispheres 11.7
2250 Female, age 67, right hemisphere 11.6
2245 Female, age 91, both hemispheres 11.5
2532 Female, age 72, left hemisphere 11.0
1990 Female, age 91, right hemisphere 10.8
2693 Female, age 94, both hemispheres 10.2
2692 Male, age 74, both hemispheres 9.5
2622 Female, age 67, right hemisphere 8.6
Perirhinal gyrus
nTPM: 11.7
2521 Female, age 94, right hemisphere 13.2
1847 Female, age 91, left hemisphere 12.1
1841 Female, age 85, right hemisphere 11.8
1794 Male, age 80, right hemisphere 10.9
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 11.1
2042 Male, age 76, both hemispheres 12.2
1901 Male, age 80, both hemispheres 12.1
2438 Female, age 94, left hemisphere 11.9
1977 Female, age 85, both hemispheres 11.1
2619 Male, age 74, both hemispheres 10.0
2729 Female, age 91, right hemisphere 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 70.4
Min nTPM: 4.4
Std nTPM: 7.5
Median nTPM: 15.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 41.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 35.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 33.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 31.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 30.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 30.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 30.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.6
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 8.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.6
Sample A Female 15.4
Sample B Female 10.6
Sample C Male 12.2
Sample D Male 11.9
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.5
Sample A Female 10.6
Sample B Female 13.1
Sample C Male 9.0
Sample D Male 8.5
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.6
Sample A Female 13.5
Sample B Female 12.2
Sample C Male 10.0
Sample D Male 9.6
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.5
Min nTPM: 9.3
Sample A Female 10.3
Sample B Female 9.3
Sample C Male 9.5
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.1
Min nTPM: 15.4
Sample A Male 15.4
Sample B Male 17.1
Sample C Female 18.6
Sample D Female 19.1
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 22.8
Min nTPM: 18.8
Sample A Male 22.1
Sample B Male 22.8
Sample C Female 18.8
Sample D Female 20.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.3
512761 Antisense, RP_040809_02_C11, Mouse strain C57BL/6J (56 days, male) 16.3

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