HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.9 nTPM
HPA:23.9 nTPM
GTEx:18.8 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:18.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046930
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.9
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
1855 Male, age 76, left hemisphere 21.8
1898 Male, age 80, left hemisphere 20.7
2148 Female, age 91, left hemisphere 19.8
2621 Female, age 67, right hemisphere 17.5
1911 Female, age 85, right hemisphere 17.3
2529 Female, age 94, left hemisphere 17.1
Dentate gyrus
nTPM: 19.8
1927 Female, age 91, both hemispheres 23.3
2531 Female, age 67, both hemispheres 20.8
2246 Female, age 85, both hemispheres 20.0
2528 Male, age 74, both hemispheres 19.5
2010 Male, age 76, both hemispheres 19.2
2530 Female, age 94, left hemisphere 16.3
Entorhinal gyrus
nTPM: 20.7
2764 Male, age 80, right hemisphere 23.8
2613 Female, age 94, left hemisphere 22.1
1938 Female, age 85, left hemisphere 21.6
1787 Male, age 76, left hemisphere 20.8
2686 Male, age 75, right hemisphere 19.5
2117 Female, age 91, right hemisphere 16.6
Hippocampus, CA1
nTPM: 19.5
2045 Male, age 76, both hemispheres 21.5
2749 Male, age 80, left hemisphere 21.3
1873 Female, age 85, both hemispheres 19.9
2082 Female, age 91, right hemisphere 18.6
2527 Male, age 74, both hemispheres 16.1
Hippocampus, CA2
nTPM: 19.8
1892 Male, age 76, both hemispheres 23.6
1940 Female, age 85, left hemisphere 22.0
1963 Male, age 80, left hemisphere 21.0
2437 Female, age 94, left hemisphere 18.9
2113 Female, age 91, right hemisphere 18.4
2249 Male, age 74, both hemispheres 15.1
Hippocampus, CA3
nTPM: 19.5
2620 Female, age 94, left hemisphere 21.7
2861 Female, age 67, both hemispheres 21.1
2137 Male, age 80, left hemisphere 20.3
1867 Male, age 76, both hemispheres 19.0
1891 Female, age 85, both hemispheres 18.8
2436 Male, age 74, both hemispheres 16.2
Parahippocampal cortex
nTPM: 20.4
1850 Male, age 80, both hemispheres 24.5
2622 Female, age 67, right hemisphere 21.9
1933 Female, age 85, both hemispheres 21.4
1990 Female, age 91, right hemisphere 21.4
2693 Female, age 94, both hemispheres 21.0
2018 Male, age 76, both hemispheres 19.2
2532 Female, age 72, left hemisphere 19.2
2245 Female, age 91, both hemispheres 18.6
2250 Female, age 67, right hemisphere 18.6
2692 Male, age 74, both hemispheres 18.1
Perirhinal gyrus
nTPM: 23.9
1794 Male, age 80, right hemisphere 25.7
1847 Female, age 91, left hemisphere 25.7
2521 Female, age 94, right hemisphere 25.3
1841 Female, age 85, right hemisphere 22.3
2848 Male, age 76, right hemisphere 20.3
Subiculum
nTPM: 17.4
1977 Female, age 85, both hemispheres 20.2
2729 Female, age 91, right hemisphere 19.1
2619 Male, age 74, both hemispheres 18.3
1901 Male, age 80, both hemispheres 18.1
2438 Female, age 94, left hemisphere 15.1
2042 Male, age 76, both hemispheres 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 39.2
Min nTPM: 8.9
Std nTPM: 5.5
Median nTPM: 18.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 39.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 34.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 32.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 31.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 30.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 29.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 29.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 29.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 13.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.5
Sample A Female 7.5
Sample B Female 6.7
Sample C Male 5.5
Sample D Male 7.0
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.4
Sample A Female 5.4
Sample B Female 6.4
Sample C Male 5.7
Sample D Male 4.4
Subiculum
nTPM: 6.1
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.0
Sample A Female 6.8
Sample B Female 6.9
Sample C Male 5.7
Sample D Male 5.0
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.2
Min nTPM: 6.1
Sample A Female 6.3
Sample B Female 6.7
Sample C Male 6.1
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 17.7
Sample A Male 17.7
Sample B Male 18.8
Sample C Female 19.0
Sample D Female 19.2
Hippocampal formation
nTPM: 18.9
Samples: 4

Max nTPM: 20.0
Min nTPM: 17.5
Sample A Male 19.1
Sample B Male 19.1
Sample C Female 20.0
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
564749 Antisense, RP_040826_01_C02, Mouse strain C57BL/6J (56 days, male) 0.3

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