HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.9 nTPM
HPA:36.9 nTPM
GTEx:27.7 nTPM
FANTOM5:38.9 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:45.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002640Antibody CAB019291
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.9
Sample id Sample description nTPM
Hippocampus
nTPM: 36.2
2148 Female, age 91, left hemisphere 37.8
2529 Female, age 94, left hemisphere 37.0
1898 Male, age 80, left hemisphere 36.4
1911 Female, age 85, right hemisphere 35.8
2621 Female, age 67, right hemisphere 35.1
1855 Male, age 76, left hemisphere 34.9
Dentate gyrus
nTPM: 35.7
2528 Male, age 74, both hemispheres 37.3
1927 Female, age 91, both hemispheres 36.0
2010 Male, age 76, both hemispheres 35.9
2531 Female, age 67, both hemispheres 35.6
2246 Female, age 85, both hemispheres 35.1
2530 Female, age 94, left hemisphere 34.4
Entorhinal gyrus
nTPM: 35.7
2764 Male, age 80, right hemisphere 36.5
1787 Male, age 76, left hemisphere 36.2
2117 Female, age 91, right hemisphere 36.2
1938 Female, age 85, left hemisphere 35.9
2613 Female, age 94, left hemisphere 34.9
2686 Male, age 75, right hemisphere 34.7
Hippocampus, CA1
nTPM: 35.8
2749 Male, age 80, left hemisphere 37.3
2082 Female, age 91, right hemisphere 35.7
1873 Female, age 85, both hemispheres 35.5
2045 Male, age 76, both hemispheres 35.5
2527 Male, age 74, both hemispheres 34.9
Hippocampus, CA2
nTPM: 35.7
1963 Male, age 80, left hemisphere 37.9
2249 Male, age 74, both hemispheres 35.9
1892 Male, age 76, both hemispheres 35.4
1940 Female, age 85, left hemisphere 35.0
2113 Female, age 91, right hemisphere 34.9
2437 Female, age 94, left hemisphere 34.8
Hippocampus, CA3
nTPM: 36.9
2137 Male, age 80, left hemisphere 38.5
2861 Female, age 67, both hemispheres 37.4
2620 Female, age 94, left hemisphere 36.7
2436 Male, age 74, both hemispheres 36.5
1867 Male, age 76, both hemispheres 36.3
1891 Female, age 85, both hemispheres 36.3
Parahippocampal cortex
nTPM: 35.3
2692 Male, age 74, both hemispheres 36.4
1850 Male, age 80, both hemispheres 36.3
2622 Female, age 67, right hemisphere 35.8
1933 Female, age 85, both hemispheres 35.4
1990 Female, age 91, right hemisphere 35.3
2018 Male, age 76, both hemispheres 35.3
2250 Female, age 67, right hemisphere 35.0
2532 Female, age 72, left hemisphere 35.0
2693 Female, age 94, both hemispheres 34.4
2245 Female, age 91, both hemispheres 33.7
Perirhinal gyrus
nTPM: 35.5
1794 Male, age 80, right hemisphere 36.4
1841 Female, age 85, right hemisphere 36.1
1847 Female, age 91, left hemisphere 36.1
2521 Female, age 94, right hemisphere 34.7
2848 Male, age 76, right hemisphere 34.4
Subiculum
nTPM: 35.7
2729 Female, age 91, right hemisphere 36.8
2619 Male, age 74, both hemispheres 36.4
1977 Female, age 85, both hemispheres 36.1
1901 Male, age 80, both hemispheres 36.0
2042 Male, age 76, both hemispheres 35.8
2438 Female, age 94, left hemisphere 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 40.6
Min nTPM: 20.2
Std nTPM: 3.7
Median nTPM: 27.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 40.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 40.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 38.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 36.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 35.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 35.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 35.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 34.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 34.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 34.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.9
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 18.6
Min nTPM: 16.5
Sample A Female 18.6
Sample B Female 16.8
Sample C Male 17.3
Sample D Male 16.5
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 16.8
Min nTPM: 13.8
Sample A Female 15.9
Sample B Female 16.4
Sample C Male 16.8
Sample D Male 13.8
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.3
Sample A Female 18.8
Sample B Female 15.1
Sample C Male 15.2
Sample D Male 14.3
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 20.0
Min nTPM: 13.6
Sample A Female 15.3
Sample B Female 13.6
Sample C Male 20.0
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 45.4
Min nTPM: 35.9
Sample A Male 42.0
Sample B Male 45.4
Sample C Female 42.0
Sample D Female 35.9
Hippocampal formation
nTPM: 45.7
Samples: 4

Max nTPM: 46.5
Min nTPM: 44.4
Sample A Male 45.7
Sample B Male 46.5
Sample C Female 46.0
Sample D Female 44.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
1817 Antisense, RP_040526_01_B06, Mouse strain C57BL/6J (56 days, male) 0.7
1816 Antisense, RP_040526_01_B06, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.