HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:87.8 nTPM
HPA:87.8 nTPM
GTEx:179.5 nTPM
FANTOM5:154.1 Scaled Tags Per Million
Mouse:575.9 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061298Antibody CAB005042
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.8
Sample id Sample description nTPM
Hippocampus
nTPM: 85.5
1898 Male, age 80, left hemisphere 92.7
2621 Female, age 67, right hemisphere 88.3
1855 Male, age 76, left hemisphere 86.2
2529 Female, age 94, left hemisphere 83.2
2148 Female, age 91, left hemisphere 81.9
1911 Female, age 85, right hemisphere 81.0
Dentate gyrus
nTPM: 85.4
2530 Female, age 94, left hemisphere 96.4
1927 Female, age 91, both hemispheres 89.5
2010 Male, age 76, both hemispheres 86.9
2246 Female, age 85, both hemispheres 81.1
2528 Male, age 74, both hemispheres 80.0
2531 Female, age 67, both hemispheres 78.5
Entorhinal gyrus
nTPM: 83.1
1938 Female, age 85, left hemisphere 88.4
2764 Male, age 80, right hemisphere 86.3
2613 Female, age 94, left hemisphere 82.9
1787 Male, age 76, left hemisphere 82.7
2117 Female, age 91, right hemisphere 79.5
2686 Male, age 75, right hemisphere 78.6
Hippocampus, CA1
nTPM: 87.8
2749 Male, age 80, left hemisphere 101.7
1873 Female, age 85, both hemispheres 87.9
2045 Male, age 76, both hemispheres 87.4
2527 Male, age 74, both hemispheres 82.8
2082 Female, age 91, right hemisphere 79.0
Hippocampus, CA2
nTPM: 85.5
1892 Male, age 76, both hemispheres 93.7
1963 Male, age 80, left hemisphere 91.2
2437 Female, age 94, left hemisphere 85.7
2249 Male, age 74, both hemispheres 84.2
1940 Female, age 85, left hemisphere 79.6
2113 Female, age 91, right hemisphere 78.7
Hippocampus, CA3
nTPM: 85.9
2137 Male, age 80, left hemisphere 91.9
1867 Male, age 76, both hemispheres 91.0
2861 Female, age 67, both hemispheres 84.8
2620 Female, age 94, left hemisphere 83.9
2436 Male, age 74, both hemispheres 82.3
1891 Female, age 85, both hemispheres 81.4
Parahippocampal cortex
nTPM: 82.2
2250 Female, age 67, right hemisphere 86.2
1933 Female, age 85, both hemispheres 84.5
1850 Male, age 80, both hemispheres 84.3
2245 Female, age 91, both hemispheres 83.6
2532 Female, age 72, left hemisphere 82.7
1990 Female, age 91, right hemisphere 82.1
2018 Male, age 76, both hemispheres 82.0
2692 Male, age 74, both hemispheres 80.2
2622 Female, age 67, right hemisphere 79.8
2693 Female, age 94, both hemispheres 76.9
Perirhinal gyrus
nTPM: 86.3
1847 Female, age 91, left hemisphere 92.9
1841 Female, age 85, right hemisphere 87.3
1794 Male, age 80, right hemisphere 85.8
2521 Female, age 94, right hemisphere 85.8
2848 Male, age 76, right hemisphere 79.7
Subiculum
nTPM: 81.8
1901 Male, age 80, both hemispheres 84.4
2042 Male, age 76, both hemispheres 83.1
2438 Female, age 94, left hemisphere 82.8
2619 Male, age 74, both hemispheres 82.0
1977 Female, age 85, both hemispheres 81.9
2729 Female, age 91, right hemisphere 76.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 179.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 179.5
Samples: 197

Max nTPM: 332.6
Min nTPM: 95.9
Std nTPM: 39.6
Median nTPM: 172.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 332.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 304.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 300.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 289.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 288.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 270.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 269.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 259.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 258.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 257.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 253.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.1
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 129.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 575.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 541.3
Samples: 4

Max nTPM: 598.1
Min nTPM: 488.5
Sample A Male 488.5
Sample B Male 519.1
Sample C Female 559.6
Sample D Female 598.1
Hippocampal formation
nTPM: 575.9
Samples: 4

Max nTPM: 612.7
Min nTPM: 532.0
Sample A Male 612.7
Sample B Male 532.0
Sample C Female 595.0
Sample D Female 563.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
2183 Antisense, RP_040407_02_C04, Mouse strain C57BL/6J (56 days, male) 13.5
2184 Antisense, RP_040407_02_C04, Mouse strain C57BL/6J (56 days, male) 4.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.