HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:16.9 nTPM
FANTOM5:29.9 Scaled Tags Per Million
Pig:13.5 nTPM
Mouse:34.2 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033879
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.8
2529 Female, age 94, left hemisphere 21.6
1898 Male, age 80, left hemisphere 19.9
1911 Female, age 85, right hemisphere 18.7
2148 Female, age 91, left hemisphere 17.0
2621 Female, age 67, right hemisphere 15.4
1855 Male, age 76, left hemisphere 14.2
Dentate gyrus
nTPM: 20.0
2246 Female, age 85, both hemispheres 25.5
2528 Male, age 74, both hemispheres 25.3
2531 Female, age 67, both hemispheres 20.1
2530 Female, age 94, left hemisphere 18.2
2010 Male, age 76, both hemispheres 18.1
1927 Female, age 91, both hemispheres 12.6
Entorhinal gyrus
nTPM: 15.5
2117 Female, age 91, right hemisphere 19.6
2764 Male, age 80, right hemisphere 16.7
2686 Male, age 75, right hemisphere 16.1
1938 Female, age 85, left hemisphere 13.9
1787 Male, age 76, left hemisphere 13.8
2613 Female, age 94, left hemisphere 13.1
Hippocampus, CA1
nTPM: 16.1
2082 Female, age 91, right hemisphere 24.1
1873 Female, age 85, both hemispheres 18.4
2527 Male, age 74, both hemispheres 14.9
2045 Male, age 76, both hemispheres 13.6
2749 Male, age 80, left hemisphere 9.3
Hippocampus, CA2
nTPM: 17.2
2249 Male, age 74, both hemispheres 23.1
1940 Female, age 85, left hemisphere 20.0
2113 Female, age 91, right hemisphere 17.5
2437 Female, age 94, left hemisphere 16.8
1963 Male, age 80, left hemisphere 14.6
1892 Male, age 76, both hemispheres 11.0
Hippocampus, CA3
nTPM: 16.1
1891 Female, age 85, both hemispheres 20.3
2620 Female, age 94, left hemisphere 19.5
2436 Male, age 74, both hemispheres 17.5
2861 Female, age 67, both hemispheres 14.9
2137 Male, age 80, left hemisphere 12.4
1867 Male, age 76, both hemispheres 12.1
Parahippocampal cortex
nTPM: 15.7
2693 Female, age 94, both hemispheres 21.5
1933 Female, age 85, both hemispheres 17.2
1990 Female, age 91, right hemisphere 16.2
2250 Female, age 67, right hemisphere 15.8
2692 Male, age 74, both hemispheres 15.8
2245 Female, age 91, both hemispheres 15.0
2532 Female, age 72, left hemisphere 14.8
1850 Male, age 80, both hemispheres 13.9
2018 Male, age 76, both hemispheres 13.5
2622 Female, age 67, right hemisphere 13.0
Perirhinal gyrus
nTPM: 14.2
1794 Male, age 80, right hemisphere 16.1
1847 Female, age 91, left hemisphere 14.0
2521 Female, age 94, right hemisphere 14.0
2848 Male, age 76, right hemisphere 14.0
1841 Female, age 85, right hemisphere 13.0
Subiculum
nTPM: 18.1
1977 Female, age 85, both hemispheres 21.0
2042 Male, age 76, both hemispheres 19.3
2729 Female, age 91, right hemisphere 19.3
1901 Male, age 80, both hemispheres 18.5
2619 Male, age 74, both hemispheres 17.1
2438 Female, age 94, left hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 63.2
Min nTPM: 4.3
Std nTPM: 8.7
Median nTPM: 15.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 63.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 53.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 53.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 47.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 39.2
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 39.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 36.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 33.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 33.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 32.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.9
FF:10153-102I9 76 years, female 35.9
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.2
Sample A Female 11.2
Sample B Female 9.9
Sample C Male 9.2
Sample D Male 7.2
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.7
Sample A Female 12.9
Sample B Female 11.7
Sample C Male 9.2
Sample D Male 8.7
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.1
Sample A Female 12.2
Sample B Female 9.1
Sample C Male 14.0
Sample D Male 9.8
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 9.1
Sample A Female 16.7
Sample B Female 9.1
Sample C Male 18.1
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.4
Sample A Male 15.2
Sample B Male 12.4
Sample C Female 20.0
Sample D Female 19.3
Hippocampal formation
nTPM: 34.2
Samples: 4

Max nTPM: 42.4
Min nTPM: 26.9
Sample A Male 26.9
Sample B Male 37.3
Sample C Female 42.4
Sample D Female 30.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
73817421 Antisense, RP_050921_01_C07, Mouse strain C57BL/6J (56 days, male) 3.5
71723985 Antisense, RP_050921_01_C07, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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