HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:25.5 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:62.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030521Antibody HPA030522Antibody HPA030523Antibody CAB000148
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells Not detectedNot detectedNot detectedNot detected








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1898 Male, age 80, left hemisphere 22.4
1911 Female, age 85, right hemisphere 22.2
2529 Female, age 94, left hemisphere 21.7
2621 Female, age 67, right hemisphere 21.3
2148 Female, age 91, left hemisphere 21.1
1855 Male, age 76, left hemisphere 21.0
Dentate gyrus
nTPM: 21.5
2528 Male, age 74, both hemispheres 23.3
2010 Male, age 76, both hemispheres 22.3
1927 Female, age 91, both hemispheres 21.4
2530 Female, age 94, left hemisphere 21.2
2246 Female, age 85, both hemispheres 21.1
2531 Female, age 67, both hemispheres 19.8
Entorhinal gyrus
nTPM: 21.7
1938 Female, age 85, left hemisphere 22.9
2117 Female, age 91, right hemisphere 22.8
2764 Male, age 80, right hemisphere 22.1
1787 Male, age 76, left hemisphere 21.9
2686 Male, age 75, right hemisphere 20.3
2613 Female, age 94, left hemisphere 20.2
Hippocampus, CA1
nTPM: 21.6
2527 Male, age 74, both hemispheres 22.2
1873 Female, age 85, both hemispheres 21.9
2082 Female, age 91, right hemisphere 21.7
2749 Male, age 80, left hemisphere 21.2
2045 Male, age 76, both hemispheres 20.8
Hippocampus, CA2
nTPM: 23.0
2249 Male, age 74, both hemispheres 26.4
1892 Male, age 76, both hemispheres 23.5
1940 Female, age 85, left hemisphere 23.0
2113 Female, age 91, right hemisphere 22.2
1963 Male, age 80, left hemisphere 21.6
2437 Female, age 94, left hemisphere 21.2
Hippocampus, CA3
nTPM: 21.9
2436 Male, age 74, both hemispheres 24.2
1867 Male, age 76, both hemispheres 22.9
1891 Female, age 85, both hemispheres 22.7
2137 Male, age 80, left hemisphere 21.5
2620 Female, age 94, left hemisphere 20.9
2861 Female, age 67, both hemispheres 19.0
Parahippocampal cortex
nTPM: 21.1
1850 Male, age 80, both hemispheres 22.4
1933 Female, age 85, both hemispheres 22.4
1990 Female, age 91, right hemisphere 22.2
2250 Female, age 67, right hemisphere 22.0
2018 Male, age 76, both hemispheres 21.8
2693 Female, age 94, both hemispheres 20.7
2245 Female, age 91, both hemispheres 20.4
2532 Female, age 72, left hemisphere 20.4
2692 Male, age 74, both hemispheres 20.0
2622 Female, age 67, right hemisphere 18.7
Perirhinal gyrus
nTPM: 21.8
1841 Female, age 85, right hemisphere 22.4
1794 Male, age 80, right hemisphere 22.3
2848 Male, age 76, right hemisphere 21.6
1847 Female, age 91, left hemisphere 21.5
2521 Female, age 94, right hemisphere 21.0
Subiculum
nTPM: 22.0
2042 Male, age 76, both hemispheres 23.3
1977 Female, age 85, both hemispheres 23.1
1901 Male, age 80, both hemispheres 22.5
2729 Female, age 91, right hemisphere 22.1
2619 Male, age 74, both hemispheres 21.7
2438 Female, age 94, left hemisphere 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.5
Samples: 197

Max nTPM: 93.4
Min nTPM: 15.3
Std nTPM: 7.2
Median nTPM: 24.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 93.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 43.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 40.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 38.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 37.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 36.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10153-102I9 76 years, female 27.3
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.2
Sample A Female 6.5
Sample B Female 5.2
Sample C Male 5.7
Sample D Male 5.2
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.2
Sample A Female 4.8
Sample B Female 5.4
Sample C Male 4.9
Sample D Male 4.2
Subiculum
nTPM: 4.8
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.2
Sample A Female 5.3
Sample B Female 5.0
Sample C Male 4.2
Sample D Male 4.8
Ventral hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.7
Sample A Female 5.0
Sample B Female 4.7
Sample C Male 4.9
Sample D Male 5.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.4
Samples: 4

Max nTPM: 60.9
Min nTPM: 51.4
Sample A Male 58.9
Sample B Male 60.9
Sample C Female 58.5
Sample D Female 51.4
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 70.9
Min nTPM: 56.7
Sample A Male 70.9
Sample B Male 58.5
Sample C Female 56.7
Sample D Female 63.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75826584 Antisense, RP_060601_01_C01, Mouse strain C57BL/6J (56 days, male) 0.5

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