HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:51.0 nTPM
HPA:51.0 nTPM
GTEx:47.4 nTPM
FANTOM5:63.0 Scaled Tags Per Million
Pig:33.6 nTPM
Mouse:86.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.0
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
1898 Male, age 80, left hemisphere 49.6
2621 Female, age 67, right hemisphere 48.1
2529 Female, age 94, left hemisphere 47.1
2148 Female, age 91, left hemisphere 47.0
1855 Male, age 76, left hemisphere 46.1
1911 Female, age 85, right hemisphere 44.7
Dentate gyrus
nTPM: 48.3
2010 Male, age 76, both hemispheres 50.2
2530 Female, age 94, left hemisphere 49.5
1927 Female, age 91, both hemispheres 49.4
2246 Female, age 85, both hemispheres 47.2
2528 Male, age 74, both hemispheres 46.9
2531 Female, age 67, both hemispheres 46.8
Entorhinal gyrus
nTPM: 49.5
2686 Male, age 75, right hemisphere 50.7
2764 Male, age 80, right hemisphere 50.7
1787 Male, age 76, left hemisphere 49.6
2613 Female, age 94, left hemisphere 49.3
1938 Female, age 85, left hemisphere 48.6
2117 Female, age 91, right hemisphere 48.1
Hippocampus, CA1
nTPM: 48.9
2749 Male, age 80, left hemisphere 51.3
2045 Male, age 76, both hemispheres 49.3
1873 Female, age 85, both hemispheres 49.1
2082 Female, age 91, right hemisphere 47.6
2527 Male, age 74, both hemispheres 47.1
Hippocampus, CA2
nTPM: 48.4
1963 Male, age 80, left hemisphere 52.0
1892 Male, age 76, both hemispheres 51.4
2437 Female, age 94, left hemisphere 47.4
2113 Female, age 91, right hemisphere 46.8
2249 Male, age 74, both hemispheres 46.5
1940 Female, age 85, left hemisphere 46.2
Hippocampus, CA3
nTPM: 46.6
1867 Male, age 76, both hemispheres 47.2
2620 Female, age 94, left hemisphere 47.0
2137 Male, age 80, left hemisphere 46.8
1891 Female, age 85, both hemispheres 46.7
2861 Female, age 67, both hemispheres 46.5
2436 Male, age 74, both hemispheres 45.5
Parahippocampal cortex
nTPM: 48.7
1850 Male, age 80, both hemispheres 52.1
2532 Female, age 72, left hemisphere 50.0
1990 Female, age 91, right hemisphere 49.4
2693 Female, age 94, both hemispheres 48.7
1933 Female, age 85, both hemispheres 48.5
2245 Female, age 91, both hemispheres 48.1
2692 Male, age 74, both hemispheres 48.1
2250 Female, age 67, right hemisphere 48.0
2622 Female, age 67, right hemisphere 47.8
2018 Male, age 76, both hemispheres 46.5
Perirhinal gyrus
nTPM: 51.0
1847 Female, age 91, left hemisphere 52.2
1841 Female, age 85, right hemisphere 51.9
1794 Male, age 80, right hemisphere 51.5
2848 Male, age 76, right hemisphere 49.9
2521 Female, age 94, right hemisphere 49.6
Subiculum
nTPM: 47.2
2438 Female, age 94, left hemisphere 50.5
1977 Female, age 85, both hemispheres 49.6
1901 Male, age 80, both hemispheres 47.8
2619 Male, age 74, both hemispheres 46.4
2729 Female, age 91, right hemisphere 45.7
2042 Male, age 76, both hemispheres 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.4
Samples: 197

Max nTPM: 83.7
Min nTPM: 25.6
Std nTPM: 9.6
Median nTPM: 46.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 69.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 68.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 68.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 66.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 65.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 65.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 65.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 64.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 63.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.0
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 52.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 43.6
Min nTPM: 25.5
Sample A Female 43.6
Sample B Female 33.9
Sample C Male 31.5
Sample D Male 25.5
Entorhinal cortex
nTPM: 31.9
Samples: 4

Max nTPM: 36.3
Min nTPM: 26.8
Sample A Female 34.3
Sample B Female 36.3
Sample C Male 30.1
Sample D Male 26.8
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 38.7
Min nTPM: 23.0
Sample A Female 38.7
Sample B Female 26.2
Sample C Male 24.6
Sample D Male 23.0
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 36.3
Min nTPM: 22.8
Sample A Female 30.5
Sample B Female 22.8
Sample C Male 36.3
Sample D Male 32.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.5
Samples: 4

Max nTPM: 88.0
Min nTPM: 83.9
Sample A Male 83.9
Sample B Male 88.0
Sample C Female 86.2
Sample D Female 87.7
Hippocampal formation
nTPM: 86.4
Samples: 4

Max nTPM: 94.2
Min nTPM: 82.3
Sample A Male 86.0
Sample B Male 83.2
Sample C Female 94.2
Sample D Female 82.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
67978685 Antisense, RP_040923_01_E10, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.