HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.3 nTPM
HPA:23.3 nTPM
GTEx:23.1 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:27.3 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038902Antibody HPA038903
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.3
Sample id Sample description nTPM
Hippocampus
nTPM: 19.8
1855 Male, age 76, left hemisphere 23.5
2148 Female, age 91, left hemisphere 21.3
2529 Female, age 94, left hemisphere 19.8
1898 Male, age 80, left hemisphere 19.3
2621 Female, age 67, right hemisphere 18.0
1911 Female, age 85, right hemisphere 16.8
Dentate gyrus
nTPM: 19.2
1927 Female, age 91, both hemispheres 21.1
2010 Male, age 76, both hemispheres 20.5
2246 Female, age 85, both hemispheres 20.3
2531 Female, age 67, both hemispheres 18.5
2530 Female, age 94, left hemisphere 18.1
2528 Male, age 74, both hemispheres 16.8
Entorhinal gyrus
nTPM: 22.1
1938 Female, age 85, left hemisphere 27.3
2613 Female, age 94, left hemisphere 23.8
2686 Male, age 75, right hemisphere 22.3
1787 Male, age 76, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.2
2117 Female, age 91, right hemisphere 18.4
Hippocampus, CA1
nTPM: 19.0
1873 Female, age 85, both hemispheres 20.5
2749 Male, age 80, left hemisphere 19.9
2082 Female, age 91, right hemisphere 18.2
2045 Male, age 76, both hemispheres 18.1
2527 Male, age 74, both hemispheres 18.0
Hippocampus, CA2
nTPM: 19.5
1892 Male, age 76, both hemispheres 24.5
1963 Male, age 80, left hemisphere 22.1
1940 Female, age 85, left hemisphere 19.0
2113 Female, age 91, right hemisphere 18.2
2437 Female, age 94, left hemisphere 17.7
2249 Male, age 74, both hemispheres 15.6
Hippocampus, CA3
nTPM: 19.4
2137 Male, age 80, left hemisphere 22.4
2620 Female, age 94, left hemisphere 22.1
1867 Male, age 76, both hemispheres 19.5
1891 Female, age 85, both hemispheres 18.7
2861 Female, age 67, both hemispheres 17.8
2436 Male, age 74, both hemispheres 16.1
Parahippocampal cortex
nTPM: 20.6
1933 Female, age 85, both hemispheres 26.1
1850 Male, age 80, both hemispheres 24.5
2693 Female, age 94, both hemispheres 21.8
2018 Male, age 76, both hemispheres 21.0
2250 Female, age 67, right hemisphere 20.4
2245 Female, age 91, both hemispheres 20.1
1990 Female, age 91, right hemisphere 18.7
2622 Female, age 67, right hemisphere 18.2
2532 Female, age 72, left hemisphere 17.6
2692 Male, age 74, both hemispheres 17.3
Perirhinal gyrus
nTPM: 23.3
1841 Female, age 85, right hemisphere 25.4
1847 Female, age 91, left hemisphere 25.0
2521 Female, age 94, right hemisphere 22.6
1794 Male, age 80, right hemisphere 21.7
2848 Male, age 76, right hemisphere 21.6
Subiculum
nTPM: 18.5
1901 Male, age 80, both hemispheres 24.3
1977 Female, age 85, both hemispheres 20.5
2042 Male, age 76, both hemispheres 19.2
2729 Female, age 91, right hemisphere 16.5
2619 Male, age 74, both hemispheres 16.2
2438 Female, age 94, left hemisphere 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 50.0
Min nTPM: 12.1
Std nTPM: 6.3
Median nTPM: 21.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 50.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 41.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 40.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 40.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 38.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 38.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 34.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 33.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 33.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.1
FF:10169-103B7 60 years, female 65.9
FF:10153-102I9 76 years, female 64.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 17.8
Sample A Female 25.8
Sample B Female 21.2
Sample C Male 23.2
Sample D Male 17.8
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.8
Sample A Female 19.9
Sample B Female 24.3
Sample C Male 20.8
Sample D Male 16.8
Subiculum
nTPM: 20.2
Samples: 4

Max nTPM: 23.0
Min nTPM: 18.7
Sample A Female 23.0
Sample B Female 18.7
Sample C Male 19.2
Sample D Male 19.9
Ventral hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.5
Sample A Female 23.2
Sample B Female 20.1
Sample C Male 18.5
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 29.3
Min nTPM: 25.9
Sample A Male 26.2
Sample B Male 27.4
Sample C Female 25.9
Sample D Female 29.3
Hippocampal formation
nTPM: 27.3
Samples: 4

Max nTPM: 29.0
Min nTPM: 25.7
Sample A Male 29.0
Sample B Male 28.1
Sample C Female 25.7
Sample D Female 26.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69080527 Antisense, RP_050324_02_C08, Mouse strain C57BL/6J (56 days, male) 0.7

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