HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.7 nTPM
HPA:39.7 nTPM
GTEx:26.2 nTPM
FANTOM5:32.8 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:37.7 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047204
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.7
Sample id Sample description nTPM
Hippocampus
nTPM: 35.8
1898 Male, age 80, left hemisphere 37.2
1855 Male, age 76, left hemisphere 36.1
2148 Female, age 91, left hemisphere 36.0
2621 Female, age 67, right hemisphere 35.9
1911 Female, age 85, right hemisphere 35.3
2529 Female, age 94, left hemisphere 34.3
Dentate gyrus
nTPM: 35.6
1927 Female, age 91, both hemispheres 38.0
2010 Male, age 76, both hemispheres 37.2
2246 Female, age 85, both hemispheres 34.9
2528 Male, age 74, both hemispheres 34.9
2531 Female, age 67, both hemispheres 34.5
2530 Female, age 94, left hemisphere 34.2
Entorhinal gyrus
nTPM: 34.7
1787 Male, age 76, left hemisphere 36.5
2764 Male, age 80, right hemisphere 35.2
2613 Female, age 94, left hemisphere 35.0
1938 Female, age 85, left hemisphere 34.5
2686 Male, age 75, right hemisphere 33.9
2117 Female, age 91, right hemisphere 33.1
Hippocampus, CA1
nTPM: 38.0
2749 Male, age 80, left hemisphere 44.5
2045 Male, age 76, both hemispheres 37.8
1873 Female, age 85, both hemispheres 36.4
2527 Male, age 74, both hemispheres 35.9
2082 Female, age 91, right hemisphere 35.2
Hippocampus, CA2
nTPM: 36.5
1892 Male, age 76, both hemispheres 38.7
1963 Male, age 80, left hemisphere 38.1
2249 Male, age 74, both hemispheres 38.1
2113 Female, age 91, right hemisphere 36.1
1940 Female, age 85, left hemisphere 34.9
2437 Female, age 94, left hemisphere 33.1
Hippocampus, CA3
nTPM: 39.7
2137 Male, age 80, left hemisphere 49.8
2436 Male, age 74, both hemispheres 40.4
2620 Female, age 94, left hemisphere 39.1
1867 Male, age 76, both hemispheres 37.5
2861 Female, age 67, both hemispheres 36.7
1891 Female, age 85, both hemispheres 34.2
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 36.9
2018 Male, age 76, both hemispheres 36.5
1990 Female, age 91, right hemisphere 36.0
2245 Female, age 91, both hemispheres 35.7
2250 Female, age 67, right hemisphere 34.9
2693 Female, age 94, both hemispheres 34.9
1933 Female, age 85, both hemispheres 34.3
2622 Female, age 67, right hemisphere 33.8
2532 Female, age 72, left hemisphere 33.5
2692 Male, age 74, both hemispheres 33.1
Perirhinal gyrus
nTPM: 37.0
1847 Female, age 91, left hemisphere 39.2
2848 Male, age 76, right hemisphere 36.9
1794 Male, age 80, right hemisphere 36.7
1841 Female, age 85, right hemisphere 36.1
2521 Female, age 94, right hemisphere 35.7
Subiculum
nTPM: 34.1
1901 Male, age 80, both hemispheres 36.8
2042 Male, age 76, both hemispheres 35.8
1977 Female, age 85, both hemispheres 35.4
2729 Female, age 91, right hemisphere 34.5
2619 Male, age 74, both hemispheres 32.9
2438 Female, age 94, left hemisphere 29.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 62.4
Min nTPM: 7.8
Std nTPM: 8.0
Median nTPM: 25.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 55.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 50.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 44.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 43.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 41.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 40.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 39.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 39.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.8
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 22.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.0
Sample A Female 16.3
Sample B Female 12.9
Sample C Male 12.4
Sample D Male 12.0
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.3
Sample A Female 15.1
Sample B Female 15.2
Sample C Male 14.5
Sample D Male 11.3
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.3
Sample A Female 16.3
Sample B Female 14.4
Sample C Male 12.3
Sample D Male 12.6
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 15.2
Min nTPM: 13.2
Sample A Female 14.0
Sample B Female 13.2
Sample C Male 15.2
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.6
Samples: 4

Max nTPM: 38.3
Min nTPM: 31.4
Sample A Male 38.3
Sample B Male 31.4
Sample C Female 34.4
Sample D Female 38.2
Hippocampal formation
nTPM: 37.7
Samples: 4

Max nTPM: 41.8
Min nTPM: 34.3
Sample A Male 41.8
Sample B Male 35.4
Sample C Female 34.3
Sample D Female 39.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
68745456 Antisense, RP_050210_02_A04, Mouse strain C57BL/6J (56 days, male) 1.0

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