HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.4 nTPM
HPA:11.4 nTPM
GTEx:9.3 nTPM
FANTOM5:83.2 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:65.7 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002996Antibody CAB020835
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
1898 Male, age 80, left hemisphere 11.5
2148 Female, age 91, left hemisphere 11.4
1911 Female, age 85, right hemisphere 10.5
2529 Female, age 94, left hemisphere 10.5
2621 Female, age 67, right hemisphere 9.8
1855 Male, age 76, left hemisphere 9.1
Dentate gyrus
nTPM: 10.6
2528 Male, age 74, both hemispheres 12.1
1927 Female, age 91, both hemispheres 11.6
2010 Male, age 76, both hemispheres 10.6
2246 Female, age 85, both hemispheres 10.0
2531 Female, age 67, both hemispheres 9.7
2530 Female, age 94, left hemisphere 9.5
Entorhinal gyrus
nTPM: 10.8
1938 Female, age 85, left hemisphere 12.0
1787 Male, age 76, left hemisphere 11.1
2686 Male, age 75, right hemisphere 11.0
2764 Male, age 80, right hemisphere 10.8
2117 Female, age 91, right hemisphere 10.7
2613 Female, age 94, left hemisphere 9.0
Hippocampus, CA1
nTPM: 11.0
2749 Male, age 80, left hemisphere 11.9
1873 Female, age 85, both hemispheres 11.2
2082 Female, age 91, right hemisphere 11.0
2527 Male, age 74, both hemispheres 10.7
2045 Male, age 76, both hemispheres 10.1
Hippocampus, CA2
nTPM: 11.2
1963 Male, age 80, left hemisphere 12.9
1892 Male, age 76, both hemispheres 12.3
2113 Female, age 91, right hemisphere 11.3
2249 Male, age 74, both hemispheres 11.3
1940 Female, age 85, left hemisphere 10.0
2437 Female, age 94, left hemisphere 9.6
Hippocampus, CA3
nTPM: 10.0
1867 Male, age 76, both hemispheres 11.8
1891 Female, age 85, both hemispheres 11.3
2137 Male, age 80, left hemisphere 10.4
2436 Male, age 74, both hemispheres 9.2
2620 Female, age 94, left hemisphere 9.1
2861 Female, age 67, both hemispheres 8.5
Parahippocampal cortex
nTPM: 10.7
1990 Female, age 91, right hemisphere 12.6
1850 Male, age 80, both hemispheres 12.5
2018 Male, age 76, both hemispheres 11.5
2693 Female, age 94, both hemispheres 11.0
1933 Female, age 85, both hemispheres 10.9
2250 Female, age 67, right hemisphere 10.4
2692 Male, age 74, both hemispheres 10.3
2532 Female, age 72, left hemisphere 9.6
2245 Female, age 91, both hemispheres 9.3
2622 Female, age 67, right hemisphere 8.5
Perirhinal gyrus
nTPM: 11.4
1847 Female, age 91, left hemisphere 12.9
1794 Male, age 80, right hemisphere 11.9
1841 Female, age 85, right hemisphere 11.9
2848 Male, age 76, right hemisphere 10.5
2521 Female, age 94, right hemisphere 9.8
Subiculum
nTPM: 9.8
1977 Female, age 85, both hemispheres 11.6
2729 Female, age 91, right hemisphere 10.6
1901 Male, age 80, both hemispheres 10.0
2619 Male, age 74, both hemispheres 9.7
2042 Male, age 76, both hemispheres 8.9
2438 Female, age 94, left hemisphere 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.3
Samples: 197

Max nTPM: 14.2
Min nTPM: 6.1
Std nTPM: 1.4
Median nTPM: 9.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 14.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 13.7
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 13.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 13.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 12.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 12.8
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 12.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 12.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 12.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 11.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.2
FF:10169-103B7 60 years, female 97.3
FF:10153-102I9 76 years, female 69.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 13.0
Min nTPM: 11.8
Sample A Female 12.4
Sample B Female 13.0
Sample C Male 12.1
Sample D Male 11.8
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.2
Sample A Female 12.5
Sample B Female 13.9
Sample C Male 12.5
Sample D Male 11.2
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 13.2
Min nTPM: 11.8
Sample A Female 13.0
Sample B Female 13.2
Sample C Male 12.1
Sample D Male 11.8
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.9
Sample A Female 13.1
Sample B Female 11.8
Sample C Male 10.9
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 65.7
Min nTPM: 59.8
Sample A Male 59.8
Sample B Male 60.1
Sample C Female 64.7
Sample D Female 65.7
Hippocampal formation
nTPM: 65.7
Samples: 4

Max nTPM: 68.7
Min nTPM: 60.9
Sample A Male 66.0
Sample B Male 67.2
Sample C Female 68.7
Sample D Female 60.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
393196 Antisense, RP_040804_02_C04, Mouse strain C57BL/6J (56 days, male) 8.9
70919531 Antisense, RP_050713_01_E07, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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