HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:34.0 nTPM
HPA:34.0 nTPM
GTEx:33.3 nTPM
FANTOM5:75.7 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:83.4 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Hippocampus
nTPM: 30.6
1898 Male, age 80, left hemisphere 32.8
1855 Male, age 76, left hemisphere 32.4
2621 Female, age 67, right hemisphere 32.3
2529 Female, age 94, left hemisphere 30.9
1911 Female, age 85, right hemisphere 28.8
2148 Female, age 91, left hemisphere 26.7
Dentate gyrus
nTPM: 29.7
2010 Male, age 76, both hemispheres 32.5
1927 Female, age 91, both hemispheres 32.3
2246 Female, age 85, both hemispheres 31.3
2530 Female, age 94, left hemisphere 30.1
2531 Female, age 67, both hemispheres 26.7
2528 Male, age 74, both hemispheres 25.5
Entorhinal gyrus
nTPM: 27.4
1938 Female, age 85, left hemisphere 30.4
2764 Male, age 80, right hemisphere 29.5
1787 Male, age 76, left hemisphere 28.0
2613 Female, age 94, left hemisphere 26.3
2117 Female, age 91, right hemisphere 26.1
2686 Male, age 75, right hemisphere 24.2
Hippocampus, CA1
nTPM: 34.0
2749 Male, age 80, left hemisphere 50.3
1873 Female, age 85, both hemispheres 32.1
2527 Male, age 74, both hemispheres 30.7
2045 Male, age 76, both hemispheres 30.2
2082 Female, age 91, right hemisphere 26.8
Hippocampus, CA2
nTPM: 29.7
1892 Male, age 76, both hemispheres 33.4
1963 Male, age 80, left hemisphere 32.7
2249 Male, age 74, both hemispheres 30.7
1940 Female, age 85, left hemisphere 27.7
2113 Female, age 91, right hemisphere 27.0
2437 Female, age 94, left hemisphere 26.5
Hippocampus, CA3
nTPM: 31.2
2137 Male, age 80, left hemisphere 42.9
2620 Female, age 94, left hemisphere 32.5
1867 Male, age 76, both hemispheres 30.5
2436 Male, age 74, both hemispheres 29.4
2861 Female, age 67, both hemispheres 27.0
1891 Female, age 85, both hemispheres 24.9
Parahippocampal cortex
nTPM: 28.1
2245 Female, age 91, both hemispheres 36.0
2250 Female, age 67, right hemisphere 30.9
1850 Male, age 80, both hemispheres 30.1
2532 Female, age 72, left hemisphere 29.9
1933 Female, age 85, both hemispheres 28.0
1990 Female, age 91, right hemisphere 26.6
2018 Male, age 76, both hemispheres 25.8
2693 Female, age 94, both hemispheres 25.7
2622 Female, age 67, right hemisphere 25.5
2692 Male, age 74, both hemispheres 22.8
Perirhinal gyrus
nTPM: 31.7
1794 Male, age 80, right hemisphere 33.3
1841 Female, age 85, right hemisphere 33.3
1847 Female, age 91, left hemisphere 31.6
2848 Male, age 76, right hemisphere 31.1
2521 Female, age 94, right hemisphere 29.4
Subiculum
nTPM: 27.2
1901 Male, age 80, both hemispheres 29.8
1977 Female, age 85, both hemispheres 29.5
2042 Male, age 76, both hemispheres 28.6
2619 Male, age 74, both hemispheres 27.4
2438 Female, age 94, left hemisphere 25.0
2729 Female, age 91, right hemisphere 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.3
Samples: 197

Max nTPM: 61.0
Min nTPM: 17.6
Std nTPM: 10.1
Median nTPM: 31.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 60.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 59.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 57.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 57.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 56.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 56.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 55.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 54.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 52.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 51.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.7
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 67.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.1
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.4
Samples: 4

Max nTPM: 93.1
Min nTPM: 78.3
Sample A Male 78.3
Sample B Male 84.0
Sample C Female 78.3
Sample D Female 93.1
Hippocampal formation
nTPM: 82.0
Samples: 4

Max nTPM: 86.6
Min nTPM: 75.6
Sample A Male 86.2
Sample B Male 79.5
Sample C Female 86.6
Sample D Female 75.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.