HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:508.5 nTPM
HPA:508.5 nTPM
GTEx:381.1 nTPM
FANTOM5:153.8 Scaled Tags Per Million
Pig:61.2 nTPM
Mouse:121.4 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010088Antibody CAB026356
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 508.5
Sample id Sample description nTPM
Hippocampus
nTPM: 508.5
1898 Male, age 80, left hemisphere 520.7
1855 Male, age 76, left hemisphere 513.5
2621 Female, age 67, right hemisphere 512.0
2148 Female, age 91, left hemisphere 502.9
2529 Female, age 94, left hemisphere 502.7
1911 Female, age 85, right hemisphere 499.2
Dentate gyrus
nTPM: 497.2
2010 Male, age 76, both hemispheres 515.8
2528 Male, age 74, both hemispheres 507.5
2246 Female, age 85, both hemispheres 495.7
2530 Female, age 94, left hemisphere 492.1
1927 Female, age 91, both hemispheres 486.7
2531 Female, age 67, both hemispheres 485.4
Entorhinal gyrus
nTPM: 498.1
2117 Female, age 91, right hemisphere 527.2
1938 Female, age 85, left hemisphere 499.1
1787 Male, age 76, left hemisphere 498.1
2686 Male, age 75, right hemisphere 494.2
2764 Male, age 80, right hemisphere 491.2
2613 Female, age 94, left hemisphere 478.9
Hippocampus, CA1
nTPM: 500.9
2045 Male, age 76, both hemispheres 516.0
2527 Male, age 74, both hemispheres 508.7
1873 Female, age 85, both hemispheres 503.4
2082 Female, age 91, right hemisphere 489.2
2749 Male, age 80, left hemisphere 487.0
Hippocampus, CA2
nTPM: 503.1
2249 Male, age 74, both hemispheres 524.8
1940 Female, age 85, left hemisphere 512.3
1892 Male, age 76, both hemispheres 498.0
1963 Male, age 80, left hemisphere 495.4
2113 Female, age 91, right hemisphere 495.2
2437 Female, age 94, left hemisphere 492.8
Hippocampus, CA3
nTPM: 501.8
2436 Male, age 74, both hemispheres 528.3
1891 Female, age 85, both hemispheres 511.1
1867 Male, age 76, both hemispheres 506.2
2620 Female, age 94, left hemisphere 491.5
2861 Female, age 67, both hemispheres 490.0
2137 Male, age 80, left hemisphere 483.7
Parahippocampal cortex
nTPM: 494.8
2250 Female, age 67, right hemisphere 509.9
2018 Male, age 76, both hemispheres 507.4
1933 Female, age 85, both hemispheres 500.8
1850 Male, age 80, both hemispheres 498.3
2692 Male, age 74, both hemispheres 493.0
2245 Female, age 91, both hemispheres 491.9
1990 Female, age 91, right hemisphere 491.8
2532 Female, age 72, left hemisphere 487.1
2693 Female, age 94, both hemispheres 485.3
2622 Female, age 67, right hemisphere 482.6
Perirhinal gyrus
nTPM: 495.5
1794 Male, age 80, right hemisphere 497.6
1841 Female, age 85, right hemisphere 497.0
2848 Male, age 76, right hemisphere 495.2
2521 Female, age 94, right hemisphere 494.1
1847 Female, age 91, left hemisphere 493.7
Subiculum
nTPM: 502.3
2042 Male, age 76, both hemispheres 517.3
2729 Female, age 91, right hemisphere 508.0
2619 Male, age 74, both hemispheres 505.2
1901 Male, age 80, both hemispheres 504.6
1977 Female, age 85, both hemispheres 492.9
2438 Female, age 94, left hemisphere 485.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 381.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 381.1
Samples: 197

Max nTPM: 1062.8
Min nTPM: 207.1
Std nTPM: 113.3
Median nTPM: 357.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 1062.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 918.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 864.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 842.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 763.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 753.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 624.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 575.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 570.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 566.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 560.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.8
FF:10153-102I9 76 years, female 154.9
FF:10169-103B7 60 years, female 152.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.2
Samples: 4

Max nTPM: 81.7
Min nTPM: 35.6
Sample A Female 81.7
Sample B Female 54.2
Sample C Male 73.3
Sample D Male 35.6
Entorhinal cortex
nTPM: 46.9
Samples: 4

Max nTPM: 59.5
Min nTPM: 32.0
Sample A Female 46.5
Sample B Female 59.5
Sample C Male 49.6
Sample D Male 32.0
Subiculum
nTPM: 54.3
Samples: 4

Max nTPM: 69.0
Min nTPM: 44.7
Sample A Female 69.0
Sample B Female 54.2
Sample C Male 44.7
Sample D Male 49.4
Ventral hippocampus
nTPM: 57.6
Samples: 4

Max nTPM: 74.3
Min nTPM: 45.7
Sample A Female 60.4
Sample B Female 45.7
Sample C Male 74.3
Sample D Male 50.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.6
Samples: 4

Max nTPM: 111.4
Min nTPM: 95.0
Sample A Male 104.0
Sample B Male 95.0
Sample C Female 111.4
Sample D Female 100.0
Hippocampal formation
nTPM: 121.4
Samples: 4

Max nTPM: 141.0
Min nTPM: 108.9
Sample A Male 116.2
Sample B Male 108.9
Sample C Female 119.3
Sample D Female 141.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69540611 Antisense, RP_050426_02_B02, Mouse strain C57BL/6J (56 days, male) 3.5
73992715 Antisense, RP_051214_01_E07, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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