HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.2 nTPM
HPA:40.2 nTPM
GTEx:43.4 nTPM
FANTOM5:161.8 Scaled Tags Per Million
Pig:48.5 nTPM
Mouse:45.0 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029712Antibody HPA029713
Glial cells MediumHigh
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.2
Sample id Sample description nTPM
Hippocampus
nTPM: 37.4
2621 Female, age 67, right hemisphere 45.7
1911 Female, age 85, right hemisphere 43.8
2148 Female, age 91, left hemisphere 37.5
1855 Male, age 76, left hemisphere 37.3
2529 Female, age 94, left hemisphere 35.8
1898 Male, age 80, left hemisphere 24.4
Dentate gyrus
nTPM: 37.8
2530 Female, age 94, left hemisphere 57.6
2531 Female, age 67, both hemispheres 41.9
2246 Female, age 85, both hemispheres 40.4
2010 Male, age 76, both hemispheres 39.1
1927 Female, age 91, both hemispheres 24.5
2528 Male, age 74, both hemispheres 23.3
Entorhinal gyrus
nTPM: 28.3
2117 Female, age 91, right hemisphere 40.6
2686 Male, age 75, right hemisphere 35.7
2764 Male, age 80, right hemisphere 29.4
2613 Female, age 94, left hemisphere 23.0
1787 Male, age 76, left hemisphere 20.5
1938 Female, age 85, left hemisphere 20.4
Hippocampus, CA1
nTPM: 34.4
2749 Male, age 80, left hemisphere 38.7
1873 Female, age 85, both hemispheres 38.2
2045 Male, age 76, both hemispheres 37.7
2527 Male, age 74, both hemispheres 29.1
2082 Female, age 91, right hemisphere 28.3
Hippocampus, CA2
nTPM: 28.4
1963 Male, age 80, left hemisphere 35.2
2113 Female, age 91, right hemisphere 29.7
2437 Female, age 94, left hemisphere 29.3
2249 Male, age 74, both hemispheres 26.5
1940 Female, age 85, left hemisphere 25.9
1892 Male, age 76, both hemispheres 23.7
Hippocampus, CA3
nTPM: 31.9
1891 Female, age 85, both hemispheres 44.2
2620 Female, age 94, left hemisphere 41.6
2137 Male, age 80, left hemisphere 33.9
2861 Female, age 67, both hemispheres 33.4
1867 Male, age 76, both hemispheres 27.1
2436 Male, age 74, both hemispheres 11.3
Parahippocampal cortex
nTPM: 25.3
2532 Female, age 72, left hemisphere 39.7
2245 Female, age 91, both hemispheres 36.3
2692 Male, age 74, both hemispheres 33.1
2018 Male, age 76, both hemispheres 24.5
1990 Female, age 91, right hemisphere 22.8
2622 Female, age 67, right hemisphere 21.6
1933 Female, age 85, both hemispheres 21.1
2693 Female, age 94, both hemispheres 20.6
1850 Male, age 80, both hemispheres 19.7
2250 Female, age 67, right hemisphere 14.0
Perirhinal gyrus
nTPM: 17.4
2848 Male, age 76, right hemisphere 26.1
2521 Female, age 94, right hemisphere 19.4
1794 Male, age 80, right hemisphere 16.6
1841 Female, age 85, right hemisphere 16.6
1847 Female, age 91, left hemisphere 8.6
Subiculum
nTPM: 40.2
2042 Male, age 76, both hemispheres 54.1
1901 Male, age 80, both hemispheres 50.5
2438 Female, age 94, left hemisphere 44.8
1977 Female, age 85, both hemispheres 35.9
2729 Female, age 91, right hemisphere 28.6
2619 Male, age 74, both hemispheres 27.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.4
Samples: 197

Max nTPM: 109.6
Min nTPM: 11.0
Std nTPM: 17.1
Median nTPM: 40.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 109.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 96.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 92.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 90.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 85.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 84.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 80.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 78.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 78.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 76.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 76.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.8
FF:10153-102I9 76 years, female 202.2
FF:10169-103B7 60 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 61.7
Min nTPM: 41.4
Sample A Female 61.7
Sample B Female 41.4
Sample C Male 48.2
Sample D Male 42.9
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 33.1
Min nTPM: 23.1
Sample A Female 32.2
Sample B Female 33.1
Sample C Male 23.1
Sample D Male 29.9
Subiculum
nTPM: 24.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 19.9
Sample A Female 29.2
Sample B Female 23.4
Sample C Male 19.9
Sample D Male 23.5
Ventral hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 48.4
Min nTPM: 25.3
Sample A Female 34.5
Sample B Female 25.3
Sample C Male 27.5
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 41.3
Min nTPM: 33.5
Sample A Male 41.3
Sample B Male 39.1
Sample C Female 39.8
Sample D Female 33.5
Hippocampal formation
nTPM: 45.0
Samples: 4

Max nTPM: 56.1
Min nTPM: 36.1
Sample A Male 36.1
Sample B Male 44.0
Sample C Female 56.1
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
69013278 Antisense, RP_050309_02_B10, Mouse strain C57BL/6J (56 days, male) 11.7

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