AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		41.007
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:30.5 nTPM
FANTOM5:84.0 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:66.1 nTPM
Allen mouse:6.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA072287
Amygdala mean intensity 41.007
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 31.825
Basal medial amygdaloid nucleus 24.040
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 22.745
Cortical amygdala 41.007
Central amygdala 21.974
Medial amygdaloid nucleus 25.652

AMYGDALA - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Amygdala
nTPM: 31.3
2814 Male, age 76, right hemisphere 32.7
2517 Female, age 94, left hemisphere 31.9
2695 Female, age 67, right hemisphere 31.3
2514 Male, age 75, right hemisphere 31.1
1987 Female, age 91, left hemisphere 29.6
Basal amygdala
nTPM: 31.6
2827 Female, age 67, right hemisphere 38.4
2685 Female, age 94, left hemisphere 32.6
1955 Male, age 76, both hemispheres 30.3
2110 Male, age 80, left hemisphere 30.0
2243 Female, age 91, right hemisphere 29.7
2609 Male, age 75, right hemisphere 28.4
Central amygdala
nTPM: 32.7
2826 Female, age 94, left hemisphere 44.1
2515 Male, age 75, right hemisphere 30.8
2239 Male, age 80, left hemisphere 29.8
1905 Male, age 76, both hemispheres 29.6
2701 Female, age 91, right hemisphere 29.3
Corticomedial amygdala
nTPM: 29.0
2535 Female, age 67, right hemisphere 32.6
2428 Male, age 75, right hemisphere 29.4
2429 Female, age 94, left hemisphere 29.0
2240 Male, age 76, both hemispheres 28.0
2829 Male, age 80, left hemisphere 28.0
2242 Female, age 91, right hemisphere 27.2
Lateral amygdala
nTPM: 35.3
2830 Female, age 67, right hemisphere 42.0
2534 Female, age 94, left hemisphere 39.4
2516 Male, age 75, right hemisphere 34.4
1883 Male, age 76, both hemispheres 33.5
2256 Male, age 80, left hemisphere 32.1
2255 Female, age 91, right hemisphere 30.5
Stria terminalis, bed nucleus
nTPM: 31.8
1974 Female, age 91, both hemispheres 36.9
2486 Female, age 94, both hemispheres 33.7
2201 Male, age 74, unknown 24.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 30.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 30.5
Samples: 152

Max nTPM: 75.6
Min nTPM: 8.7
Std nTPM: 10.9
Median nTPM: 27.9
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 75.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 61.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 58.3
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 57.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 57.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 57.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 53.3
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 52.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 52.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 52.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 51.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 84.0
FF:10151-102I7 76 years, female 84.0

AMYGDALA - Pig RNA-seqi
Average nTPM 6.7
Pig sample Sample description nTPM
Amygdala
nTPM: 6.7
Samples: 4

Max nTPM: 10.5
Min nTPM: 4.3
Sample A Female 10.5
Sample B Female 4.3
Sample C Male 5.1
Sample D Male 6.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 66.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 66.1
Samples: 4

Max nTPM: 82.5
Min nTPM: 55.5
Sample A Male 60.3
Sample B Male 66.1
Sample C Female 82.5
Sample D Female 55.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 6.3
70593143 Antisense, RP_050331_03_G01, Mouse strain C57BL/6J (56 days, male) 9.4
72283793 Antisense, RP_051027_01_A09, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.