HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:21.2 nTPM
HPA:21.2 nTPM
GTEx:14.1 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:2.1 nTPM
Mouse:2.6 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.2
Sample id Sample description nTPM
Hippocampus
nTPM: 17.4
2621 Female, age 67, right hemisphere 19.7
1898 Male, age 80, left hemisphere 18.0
1855 Male, age 76, left hemisphere 17.7
2529 Female, age 94, left hemisphere 16.6
1911 Female, age 85, right hemisphere 16.5
2148 Female, age 91, left hemisphere 16.0
Dentate gyrus
nTPM: 18.6
2010 Male, age 76, both hemispheres 21.0
2531 Female, age 67, both hemispheres 19.7
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 18.2
1927 Female, age 91, both hemispheres 17.7
2246 Female, age 85, both hemispheres 16.7
Entorhinal gyrus
nTPM: 21.0
2117 Female, age 91, right hemisphere 25.3
2613 Female, age 94, left hemisphere 23.9
1787 Male, age 76, left hemisphere 23.1
1938 Female, age 85, left hemisphere 18.9
2764 Male, age 80, right hemisphere 18.4
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 16.7
2045 Male, age 76, both hemispheres 18.4
2082 Female, age 91, right hemisphere 17.6
2527 Male, age 74, both hemispheres 16.5
1873 Female, age 85, both hemispheres 16.3
2749 Male, age 80, left hemisphere 14.9
Hippocampus, CA2
nTPM: 18.3
1940 Female, age 85, left hemisphere 20.9
1892 Male, age 76, both hemispheres 19.1
2249 Male, age 74, both hemispheres 19.1
2437 Female, age 94, left hemisphere 17.8
2113 Female, age 91, right hemisphere 17.4
1963 Male, age 80, left hemisphere 15.5
Hippocampus, CA3
nTPM: 19.1
2436 Male, age 74, both hemispheres 25.4
1867 Male, age 76, both hemispheres 22.9
2861 Female, age 67, both hemispheres 18.4
1891 Female, age 85, both hemispheres 16.4
2137 Male, age 80, left hemisphere 16.1
2620 Female, age 94, left hemisphere 15.6
Parahippocampal cortex
nTPM: 20.9
2018 Male, age 76, both hemispheres 24.7
2692 Male, age 74, both hemispheres 22.0
2250 Female, age 67, right hemisphere 21.8
2693 Female, age 94, both hemispheres 21.7
1850 Male, age 80, both hemispheres 21.4
2245 Female, age 91, both hemispheres 20.9
1990 Female, age 91, right hemisphere 20.8
2532 Female, age 72, left hemisphere 19.7
1933 Female, age 85, both hemispheres 18.3
2622 Female, age 67, right hemisphere 18.1
Perirhinal gyrus
nTPM: 21.2
1847 Female, age 91, left hemisphere 24.2
2521 Female, age 94, right hemisphere 22.3
1794 Male, age 80, right hemisphere 21.4
1841 Female, age 85, right hemisphere 19.4
2848 Male, age 76, right hemisphere 18.5
Subiculum
nTPM: 20.2
2619 Male, age 74, both hemispheres 24.4
2042 Male, age 76, both hemispheres 22.4
2729 Female, age 91, right hemisphere 19.8
2438 Female, age 94, left hemisphere 19.4
1901 Male, age 80, both hemispheres 17.8
1977 Female, age 85, both hemispheres 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 62.1
Min nTPM: 1.3
Std nTPM: 10.6
Median nTPM: 11.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 62.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 58.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 49.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 47.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.8
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 41.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 41.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 40.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 40.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 38.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 35.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.1
FF:10169-103B7 60 years, female 54.4
FF:10153-102I9 76 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.6
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.6
Sample C Male 1.9
Sample D Male 2.0
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 2.5
Sample C Male 2.2
Sample D Male 2.6
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 2.5
Sample C Male 1.9
Sample D Male 2.6
Ventral hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 2.3
Sample C Male 1.7
Sample D Male 2.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.1
Sample A Male 1.1
Sample B Male 1.1
Sample C Female 2.0
Sample D Female 1.6
Hippocampal formation
nTPM: 2.6
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.2
Sample A Male 2.2
Sample B Male 2.2
Sample C Female 3.3
Sample D Female 2.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
74581367 Antisense, RP_050921_01_H11, Mouse strain C57BL/6J (56 days, male) 17.5
71789783 Antisense, RP_050921_01_H11, Mouse strain C57BL/6J (56 days, male) 8.0

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