HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.7 nTPM
HPA:45.7 nTPM
GTEx:49.1 nTPM
FANTOM5:162.5 Scaled Tags Per Million
Pig:56.3 nTPM
Mouse:96.7 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057821Antibody HPA076772
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
1898 Male, age 80, left hemisphere 39.9
1911 Female, age 85, right hemisphere 39.9
1855 Male, age 76, left hemisphere 38.6
2621 Female, age 67, right hemisphere 32.1
2148 Female, age 91, left hemisphere 21.2
2529 Female, age 94, left hemisphere 20.6
Dentate gyrus
nTPM: 33.8
2530 Female, age 94, left hemisphere 47.3
2010 Male, age 76, both hemispheres 42.4
1927 Female, age 91, both hemispheres 34.5
2531 Female, age 67, both hemispheres 27.4
2246 Female, age 85, both hemispheres 26.7
2528 Male, age 74, both hemispheres 24.4
Entorhinal gyrus
nTPM: 29.0
2764 Male, age 80, right hemisphere 39.0
2117 Female, age 91, right hemisphere 31.9
1787 Male, age 76, left hemisphere 29.8
1938 Female, age 85, left hemisphere 28.3
2613 Female, age 94, left hemisphere 27.9
2686 Male, age 75, right hemisphere 17.3
Hippocampus, CA1
nTPM: 45.7
2749 Male, age 80, left hemisphere 105.2
1873 Female, age 85, both hemispheres 38.8
2045 Male, age 76, both hemispheres 38.6
2527 Male, age 74, both hemispheres 25.4
2082 Female, age 91, right hemisphere 20.4
Hippocampus, CA2
nTPM: 34.5
1963 Male, age 80, left hemisphere 53.1
1892 Male, age 76, both hemispheres 42.0
2249 Male, age 74, both hemispheres 31.4
1940 Female, age 85, left hemisphere 28.9
2437 Female, age 94, left hemisphere 27.2
2113 Female, age 91, right hemisphere 24.1
Hippocampus, CA3
nTPM: 37.6
2137 Male, age 80, left hemisphere 85.6
1867 Male, age 76, both hemispheres 41.8
1891 Female, age 85, both hemispheres 40.8
2620 Female, age 94, left hemisphere 22.5
2436 Male, age 74, both hemispheres 18.0
2861 Female, age 67, both hemispheres 16.7
Parahippocampal cortex
nTPM: 28.2
1850 Male, age 80, both hemispheres 40.0
2532 Female, age 72, left hemisphere 36.7
1933 Female, age 85, both hemispheres 33.3
2693 Female, age 94, both hemispheres 32.7
2018 Male, age 76, both hemispheres 30.5
2245 Female, age 91, both hemispheres 28.9
1990 Female, age 91, right hemisphere 28.8
2692 Male, age 74, both hemispheres 22.4
2250 Female, age 67, right hemisphere 17.6
2622 Female, age 67, right hemisphere 11.4
Perirhinal gyrus
nTPM: 33.5
2521 Female, age 94, right hemisphere 41.9
1794 Male, age 80, right hemisphere 36.3
2848 Male, age 76, right hemisphere 32.9
1841 Female, age 85, right hemisphere 31.2
1847 Female, age 91, left hemisphere 25.1
Subiculum
nTPM: 38.3
1901 Male, age 80, both hemispheres 65.5
2042 Male, age 76, both hemispheres 51.6
1977 Female, age 85, both hemispheres 41.4
2438 Female, age 94, left hemisphere 32.8
2729 Female, age 91, right hemisphere 20.4
2619 Male, age 74, both hemispheres 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.1
Samples: 197

Max nTPM: 124.8
Min nTPM: 8.5
Std nTPM: 21.7
Median nTPM: 46.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 124.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 109.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 104.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 103.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 100.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 99.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 96.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 96.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 96.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 95.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 93.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 162.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.5
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 146.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.9
Samples: 4

Max nTPM: 69.4
Min nTPM: 33.4
Sample A Female 69.4
Sample B Female 46.2
Sample C Male 58.4
Sample D Male 33.4
Entorhinal cortex
nTPM: 56.4
Samples: 4

Max nTPM: 63.2
Min nTPM: 51.7
Sample A Female 58.0
Sample B Female 63.2
Sample C Male 51.7
Sample D Male 52.5
Subiculum
nTPM: 37.1
Samples: 4

Max nTPM: 44.1
Min nTPM: 32.2
Sample A Female 44.1
Sample B Female 36.7
Sample C Male 32.2
Sample D Male 35.4
Ventral hippocampus
nTPM: 37.8
Samples: 4

Max nTPM: 43.8
Min nTPM: 28.3
Sample A Female 39.6
Sample B Female 28.3
Sample C Male 39.5
Sample D Male 43.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.8
Samples: 4

Max nTPM: 75.0
Min nTPM: 58.2
Sample A Male 61.0
Sample B Male 58.2
Sample C Female 65.1
Sample D Female 75.0
Hippocampal formation
nTPM: 96.7
Samples: 4

Max nTPM: 108.0
Min nTPM: 77.5
Sample A Male 94.8
Sample B Male 106.6
Sample C Female 108.0
Sample D Female 77.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
69012789 Antisense, RP_050309_01_E03, Mouse strain C57BL/6J (56 days, male) 12.6
70301084 Antisense, RP_050309_01_E03, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

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