HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.3 nTPM
HPA:16.3 nTPM
GTEx:13.7 nTPM
FANTOM5:72.9 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:52.8 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014585
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
2148 Female, age 91, left hemisphere 15.4
1898 Male, age 80, left hemisphere 14.9
1855 Male, age 76, left hemisphere 14.4
2621 Female, age 67, right hemisphere 13.8
1911 Female, age 85, right hemisphere 13.6
2529 Female, age 94, left hemisphere 11.4
Dentate gyrus
nTPM: 14.6
1927 Female, age 91, both hemispheres 17.8
2528 Male, age 74, both hemispheres 16.1
2531 Female, age 67, both hemispheres 15.2
2246 Female, age 85, both hemispheres 14.1
2010 Male, age 76, both hemispheres 12.6
2530 Female, age 94, left hemisphere 11.7
Entorhinal gyrus
nTPM: 14.6
2613 Female, age 94, left hemisphere 16.1
1938 Female, age 85, left hemisphere 15.5
2764 Male, age 80, right hemisphere 15.4
2686 Male, age 75, right hemisphere 14.0
2117 Female, age 91, right hemisphere 13.5
1787 Male, age 76, left hemisphere 13.2
Hippocampus, CA1
nTPM: 15.6
2749 Male, age 80, left hemisphere 17.8
2527 Male, age 74, both hemispheres 15.3
2045 Male, age 76, both hemispheres 15.1
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.8
Hippocampus, CA2
nTPM: 13.8
1892 Male, age 76, both hemispheres 15.3
1963 Male, age 80, left hemisphere 14.4
2249 Male, age 74, both hemispheres 14.1
2113 Female, age 91, right hemisphere 13.6
2437 Female, age 94, left hemisphere 13.2
1940 Female, age 85, left hemisphere 12.4
Hippocampus, CA3
nTPM: 15.1
2620 Female, age 94, left hemisphere 17.5
2137 Male, age 80, left hemisphere 17.2
2436 Male, age 74, both hemispheres 14.4
1867 Male, age 76, both hemispheres 14.0
1891 Female, age 85, both hemispheres 13.9
2861 Female, age 67, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.1
2693 Female, age 94, both hemispheres 19.8
2250 Female, age 67, right hemisphere 16.4
1990 Female, age 91, right hemisphere 15.3
2532 Female, age 72, left hemisphere 15.0
1850 Male, age 80, both hemispheres 14.9
1933 Female, age 85, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.4
2692 Male, age 74, both hemispheres 14.0
2622 Female, age 67, right hemisphere 13.8
2018 Male, age 76, both hemispheres 12.0
Perirhinal gyrus
nTPM: 16.3
2848 Male, age 76, right hemisphere 16.7
1841 Female, age 85, right hemisphere 16.5
1847 Female, age 91, left hemisphere 16.4
2521 Female, age 94, right hemisphere 16.2
1794 Male, age 80, right hemisphere 15.9
Subiculum
nTPM: 13.2
1977 Female, age 85, both hemispheres 15.8
2729 Female, age 91, right hemisphere 14.2
2619 Male, age 74, both hemispheres 13.8
1901 Male, age 80, both hemispheres 13.6
2438 Female, age 94, left hemisphere 11.0
2042 Male, age 76, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 25.9
Min nTPM: 6.1
Std nTPM: 2.8
Median nTPM: 13.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 24.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 21.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 21.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 20.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 19.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 19.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 18.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 18.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.9
FF:10169-103B7 60 years, female 82.6
FF:10153-102I9 76 years, female 63.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.3
Sample C Male 0.1
Sample D Male 0.0
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 51.8
Min nTPM: 42.3
Sample A Male 49.1
Sample B Male 50.3
Sample C Female 51.8
Sample D Female 42.3
Hippocampal formation
nTPM: 52.8
Samples: 4

Max nTPM: 64.2
Min nTPM: 47.2
Sample A Male 64.2
Sample B Male 47.2
Sample C Female 47.8
Sample D Female 52.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
67815953 Antisense, RP_040920_02_C05, Mouse strain C57BL/6J (56 days, male) 2.1

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