HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.6 nTPM
HPA:14.6 nTPM
GTEx:12.8 nTPM
FANTOM5:94.0 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:22.6 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
2529 Female, age 94, left hemisphere 12.8
2621 Female, age 67, right hemisphere 10.7
1898 Male, age 80, left hemisphere 10.5
1911 Female, age 85, right hemisphere 9.8
1855 Male, age 76, left hemisphere 8.7
2148 Female, age 91, left hemisphere 6.8
Dentate gyrus
nTPM: 9.3
2530 Female, age 94, left hemisphere 17.9
2010 Male, age 76, both hemispheres 10.4
2246 Female, age 85, both hemispheres 9.5
2528 Male, age 74, both hemispheres 7.2
1927 Female, age 91, both hemispheres 5.4
2531 Female, age 67, both hemispheres 5.2
Entorhinal gyrus
nTPM: 13.0
2764 Male, age 80, right hemisphere 17.5
2117 Female, age 91, right hemisphere 14.8
2613 Female, age 94, left hemisphere 14.8
1938 Female, age 85, left hemisphere 13.6
2686 Male, age 75, right hemisphere 8.9
1787 Male, age 76, left hemisphere 8.7
Hippocampus, CA1
nTPM: 7.9
2749 Male, age 80, left hemisphere 11.5
1873 Female, age 85, both hemispheres 10.3
2527 Male, age 74, both hemispheres 8.6
2082 Female, age 91, right hemisphere 5.0
2045 Male, age 76, both hemispheres 3.9
Hippocampus, CA2
nTPM: 10.9
1940 Female, age 85, left hemisphere 12.3
1963 Male, age 80, left hemisphere 12.2
1892 Male, age 76, both hemispheres 11.8
2437 Female, age 94, left hemisphere 10.8
2249 Male, age 74, both hemispheres 10.5
2113 Female, age 91, right hemisphere 7.5
Hippocampus, CA3
nTPM: 7.8
1891 Female, age 85, both hemispheres 12.7
1867 Male, age 76, both hemispheres 11.8
2137 Male, age 80, left hemisphere 8.5
2436 Male, age 74, both hemispheres 5.8
2861 Female, age 67, both hemispheres 4.4
2620 Female, age 94, left hemisphere 3.8
Parahippocampal cortex
nTPM: 11.3
2532 Female, age 72, left hemisphere 15.7
1990 Female, age 91, right hemisphere 12.8
1933 Female, age 85, both hemispheres 12.6
1850 Male, age 80, both hemispheres 12.4
2245 Female, age 91, both hemispheres 12.2
2622 Female, age 67, right hemisphere 10.6
2692 Male, age 74, both hemispheres 10.3
2018 Male, age 76, both hemispheres 9.9
2250 Female, age 67, right hemisphere 8.7
2693 Female, age 94, both hemispheres 8.1
Perirhinal gyrus
nTPM: 10.6
2521 Female, age 94, right hemisphere 12.5
1841 Female, age 85, right hemisphere 11.2
1847 Female, age 91, left hemisphere 10.3
1794 Male, age 80, right hemisphere 9.9
2848 Male, age 76, right hemisphere 9.1
Subiculum
nTPM: 14.6
2438 Female, age 94, left hemisphere 17.9
1901 Male, age 80, both hemispheres 17.4
2042 Male, age 76, both hemispheres 17.1
1977 Female, age 85, both hemispheres 16.3
2619 Male, age 74, both hemispheres 12.9
2729 Female, age 91, right hemisphere 5.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 28.5
Min nTPM: 2.1
Std nTPM: 4.9
Median nTPM: 11.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 28.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 26.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 22.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 22.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 22.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 22.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.0
FF:10153-102I9 76 years, female 122.2
FF:10169-103B7 60 years, female 65.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 22.7
Min nTPM: 10.4
Sample A Female 22.7
Sample B Female 17.4
Sample C Male 22.6
Sample D Male 10.4
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.8
Sample A Female 14.6
Sample B Female 16.0
Sample C Male 16.3
Sample D Male 13.8
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.9
Sample A Female 19.1
Sample B Female 16.9
Sample C Male 19.3
Sample D Male 16.9
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.6
Sample A Female 21.2
Sample B Female 16.8
Sample C Male 18.8
Sample D Male 16.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 26.5
Min nTPM: 20.9
Sample A Male 21.5
Sample B Male 21.7
Sample C Female 20.9
Sample D Female 26.5
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 18.4
Sample C Female 19.0
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
74510236 Antisense, RP_060208_01_D04, Mouse strain C57BL/6J (56 days, male) 2.3

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