COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.9 nTPM
HPA:54.5 nTPM
GTEx:57.9 nTPM
FANTOM5:136.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA062724Antibody HPA063392
Endothelial cells Not detectedNot detected
Glandular cells MediumMedium
Peripheral nerve/ganglion Not detectedNot detected




COLON - HPA RNA-seqi
Average nTPM 54.5
overview
Male, age 54 		Colon sample 67
nTPM: 55
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 53.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 57
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 64.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 57.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 59.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 54.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 52.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 50.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 58
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 41.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 51.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 53.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 57.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 57.9
Samples: 373

Max nTPM: 116.3
Min nTPM: 26.0
Std nTPM: 14.7
Median nTPM: 55.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 116.3
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 114.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 108.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 105.4
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 102.9
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 102.6
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 101.8
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 100.1
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 93.7
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 93.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 91.5
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Colon - Transverse
Average nTPM: 43.6
Samples: 406

Max nTPM: 111.9
Min nTPM: 21.7
Std nTPM: 14.3
Median nTPM: 39.7
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 111.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 89.5
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 88.2
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 84.3
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 82.5
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 81.6
GTEX-1LH75-2126-SM-EVR5F 50-59 years, female 80.4
GTEX-Y114-1526-SM-4TT79 50-59 years, female 80.0
GTEX-14H4A-1926-SM-5ZZWN 40-49 years, female 79.6
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 78.1
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 78.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 136.6
FF:10014-101C5 62,83,84 years, mixed 136.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.