HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.9 nTPM
HPA:41.9 nTPM
GTEx:40.0 nTPM
FANTOM5:34.2 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:10.6 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038223
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.9
1898 Male, age 80, left hemisphere 41.8
1855 Male, age 76, left hemisphere 39.9
2529 Female, age 94, left hemisphere 39.5
1911 Female, age 85, right hemisphere 38.4
2148 Female, age 91, left hemisphere 37.6
2621 Female, age 67, right hemisphere 36.1
Dentate gyrus
nTPM: 38.4
2010 Male, age 76, both hemispheres 40.6
2246 Female, age 85, both hemispheres 39.7
1927 Female, age 91, both hemispheres 38.9
2531 Female, age 67, both hemispheres 37.7
2528 Male, age 74, both hemispheres 37.2
2530 Female, age 94, left hemisphere 36.4
Entorhinal gyrus
nTPM: 40.0
1787 Male, age 76, left hemisphere 42.8
1938 Female, age 85, left hemisphere 40.8
2764 Male, age 80, right hemisphere 40.2
2117 Female, age 91, right hemisphere 39.9
2613 Female, age 94, left hemisphere 39.0
2686 Male, age 75, right hemisphere 37.3
Hippocampus, CA1
nTPM: 40.1
1873 Female, age 85, both hemispheres 42.9
2045 Male, age 76, both hemispheres 41.9
2749 Male, age 80, left hemisphere 39.0
2082 Female, age 91, right hemisphere 38.4
2527 Male, age 74, both hemispheres 38.4
Hippocampus, CA2
nTPM: 40.1
2249 Male, age 74, both hemispheres 42.7
1892 Male, age 76, both hemispheres 41.6
2437 Female, age 94, left hemisphere 40.9
2113 Female, age 91, right hemisphere 38.9
1963 Male, age 80, left hemisphere 38.7
1940 Female, age 85, left hemisphere 37.6
Hippocampus, CA3
nTPM: 38.1
1867 Male, age 76, both hemispheres 41.2
1891 Female, age 85, both hemispheres 39.6
2436 Male, age 74, both hemispheres 38.9
2620 Female, age 94, left hemisphere 38.2
2137 Male, age 80, left hemisphere 36.6
2861 Female, age 67, both hemispheres 34.2
Parahippocampal cortex
nTPM: 39.7
2018 Male, age 76, both hemispheres 44.0
1850 Male, age 80, both hemispheres 43.0
1990 Female, age 91, right hemisphere 40.4
2693 Female, age 94, both hemispheres 40.3
1933 Female, age 85, both hemispheres 40.1
2245 Female, age 91, both hemispheres 39.0
2250 Female, age 67, right hemisphere 38.9
2532 Female, age 72, left hemisphere 38.3
2692 Male, age 74, both hemispheres 36.7
2622 Female, age 67, right hemisphere 36.6
Perirhinal gyrus
nTPM: 41.9
1794 Male, age 80, right hemisphere 44.0
1841 Female, age 85, right hemisphere 43.2
1847 Female, age 91, left hemisphere 41.6
2848 Male, age 76, right hemisphere 41.1
2521 Female, age 94, right hemisphere 39.6
Subiculum
nTPM: 38.6
1977 Female, age 85, both hemispheres 41.5
2619 Male, age 74, both hemispheres 39.2
1901 Male, age 80, both hemispheres 38.7
2042 Male, age 76, both hemispheres 38.5
2729 Female, age 91, right hemisphere 38.2
2438 Female, age 94, left hemisphere 35.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.0
Samples: 197

Max nTPM: 99.7
Min nTPM: 24.6
Std nTPM: 9.5
Median nTPM: 38.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 95.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 73.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 63.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 61.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 58.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 57.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 56.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 53.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 52.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.2
FF:10169-103B7 60 years, female 34.5
FF:10153-102I9 76 years, female 34.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 21.5
Min nTPM: 15.9
Sample A Female 21.5
Sample B Female 16.8
Sample C Male 16.4
Sample D Male 15.9
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 18.0
Min nTPM: 12.6
Sample A Female 15.1
Sample B Female 18.0
Sample C Male 14.6
Sample D Male 12.6
Subiculum
nTPM: 15.0
Samples: 4

Max nTPM: 16.5
Min nTPM: 12.5
Sample A Female 16.5
Sample B Female 15.6
Sample C Male 12.5
Sample D Male 15.5
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.7
Sample A Female 17.2
Sample B Female 14.8
Sample C Male 14.7
Sample D Male 14.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.4
Min nTPM: 10.0
Sample A Male 10.5
Sample B Male 11.4
Sample C Female 10.5
Sample D Female 10.0
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.2
Sample A Male 12.5
Sample B Male 8.8
Sample C Female 10.2
Sample D Female 8.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74821968 Antisense, RP_060321_02_F06, Mouse strain C57BL/6J (56 days, male) 0.6

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