HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.7 nTPM
HPA:33.7 nTPM
GTEx:35.2 nTPM
FANTOM5:150.5 Scaled Tags Per Million
Pig:114.9 nTPM
Mouse:201.9 nTPM
Allen mouse:18.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018304Antibody HPA018425
Glial cells HighNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
1898 Male, age 80, left hemisphere 33.1
2621 Female, age 67, right hemisphere 16.1
1855 Male, age 76, left hemisphere 13.2
1911 Female, age 85, right hemisphere 9.3
2148 Female, age 91, left hemisphere 9.2
2529 Female, age 94, left hemisphere 2.7
Dentate gyrus
nTPM: 18.6
1927 Female, age 91, both hemispheres 30.2
2010 Male, age 76, both hemispheres 21.4
2246 Female, age 85, both hemispheres 20.7
2531 Female, age 67, both hemispheres 16.1
2530 Female, age 94, left hemisphere 13.5
2528 Male, age 74, both hemispheres 9.7
Entorhinal gyrus
nTPM: 21.6
1938 Female, age 85, left hemisphere 32.8
2764 Male, age 80, right hemisphere 28.9
2613 Female, age 94, left hemisphere 27.5
1787 Male, age 76, left hemisphere 23.8
2686 Male, age 75, right hemisphere 11.3
2117 Female, age 91, right hemisphere 5.4
Hippocampus, CA1
nTPM: 22.1
2749 Male, age 80, left hemisphere 46.8
1873 Female, age 85, both hemispheres 20.3
2045 Male, age 76, both hemispheres 18.4
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 9.7
Hippocampus, CA2
nTPM: 18.5
1892 Male, age 76, both hemispheres 35.9
1963 Male, age 80, left hemisphere 26.9
2249 Male, age 74, both hemispheres 14.8
1940 Female, age 85, left hemisphere 14.4
2113 Female, age 91, right hemisphere 9.9
2437 Female, age 94, left hemisphere 8.8
Hippocampus, CA3
nTPM: 19.5
2137 Male, age 80, left hemisphere 35.4
1867 Male, age 76, both hemispheres 26.1
2436 Male, age 74, both hemispheres 16.6
2620 Female, age 94, left hemisphere 15.4
1891 Female, age 85, both hemispheres 15.0
2861 Female, age 67, both hemispheres 8.8
Parahippocampal cortex
nTPM: 23.0
1850 Male, age 80, both hemispheres 37.6
1990 Female, age 91, right hemisphere 30.8
1933 Female, age 85, both hemispheres 27.6
2693 Female, age 94, both hemispheres 27.5
2532 Female, age 72, left hemisphere 25.1
2245 Female, age 91, both hemispheres 23.1
2250 Female, age 67, right hemisphere 21.4
2018 Male, age 76, both hemispheres 16.2
2622 Female, age 67, right hemisphere 12.2
2692 Male, age 74, both hemispheres 8.8
Perirhinal gyrus
nTPM: 33.7
1847 Female, age 91, left hemisphere 43.3
1794 Male, age 80, right hemisphere 36.3
1841 Female, age 85, right hemisphere 35.1
2521 Female, age 94, right hemisphere 29.2
2848 Male, age 76, right hemisphere 24.5
Subiculum
nTPM: 14.0
1977 Female, age 85, both hemispheres 29.0
1901 Male, age 80, both hemispheres 24.0
2042 Male, age 76, both hemispheres 9.8
2619 Male, age 74, both hemispheres 8.8
2438 Female, age 94, left hemisphere 8.1
2729 Female, age 91, right hemisphere 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 197

Max nTPM: 85.1
Min nTPM: 15.4
Std nTPM: 14.4
Median nTPM: 30.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 85.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 82.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 82.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 78.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 75.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 71.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 68.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 67.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 67.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 66.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 66.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 150.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 150.5
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 103.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 114.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 107.8
Samples: 4

Max nTPM: 126.3
Min nTPM: 85.1
Sample A Female 126.3
Sample B Female 113.4
Sample C Male 106.2
Sample D Male 85.1
Entorhinal cortex
nTPM: 114.9
Samples: 4

Max nTPM: 125.7
Min nTPM: 103.8
Sample A Female 125.7
Sample B Female 117.6
Sample C Male 112.4
Sample D Male 103.8
Subiculum
nTPM: 111.3
Samples: 4

Max nTPM: 138.3
Min nTPM: 99.1
Sample A Female 138.3
Sample B Female 99.1
Sample C Male 106.0
Sample D Male 101.7
Ventral hippocampus
nTPM: 106.0
Samples: 4

Max nTPM: 127.3
Min nTPM: 82.1
Sample A Female 127.3
Sample B Female 82.1
Sample C Male 109.0
Sample D Male 105.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 201.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 195.0
Samples: 4

Max nTPM: 238.7
Min nTPM: 169.3
Sample A Male 169.3
Sample B Male 183.7
Sample C Female 188.1
Sample D Female 238.7
Hippocampal formation
nTPM: 201.9
Samples: 4

Max nTPM: 219.0
Min nTPM: 186.2
Sample A Male 198.0
Sample B Male 204.5
Sample C Female 219.0
Sample D Female 186.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.1
75198076 Antisense, RP_060502_01_F07, Mouse strain C57BL/6J (56 days, male) 18.1

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