HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:97.4 nTPM
HPA:97.4 nTPM
GTEx:91.8 nTPM
FANTOM5:130.3 Scaled Tags Per Million
Pig:403.2 nTPM
Mouse:986.0 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012778Antibody CAB018581
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.4
Sample id Sample description nTPM
Hippocampus
nTPM: 61.4
1911 Female, age 85, right hemisphere 83.6
1898 Male, age 80, left hemisphere 71.3
2621 Female, age 67, right hemisphere 62.1
2148 Female, age 91, left hemisphere 62.0
1855 Male, age 76, left hemisphere 50.1
2529 Female, age 94, left hemisphere 39.3
Dentate gyrus
nTPM: 72.1
1927 Female, age 91, both hemispheres 152.4
2531 Female, age 67, both hemispheres 70.2
2246 Female, age 85, both hemispheres 62.3
2010 Male, age 76, both hemispheres 58.9
2530 Female, age 94, left hemisphere 45.1
2528 Male, age 74, both hemispheres 43.4
Entorhinal gyrus
nTPM: 43.3
1938 Female, age 85, left hemisphere 65.8
2764 Male, age 80, right hemisphere 50.4
2613 Female, age 94, left hemisphere 49.5
1787 Male, age 76, left hemisphere 38.4
2117 Female, age 91, right hemisphere 28.6
2686 Male, age 75, right hemisphere 26.9
Hippocampus, CA1
nTPM: 95.4
2749 Male, age 80, left hemisphere 205.7
1873 Female, age 85, both hemispheres 88.6
2045 Male, age 76, both hemispheres 86.1
2527 Male, age 74, both hemispheres 51.7
2082 Female, age 91, right hemisphere 45.1
Hippocampus, CA2
nTPM: 63.1
1892 Male, age 76, both hemispheres 102.9
1963 Male, age 80, left hemisphere 80.8
2113 Female, age 91, right hemisphere 58.1
2249 Male, age 74, both hemispheres 50.3
1940 Female, age 85, left hemisphere 48.7
2437 Female, age 94, left hemisphere 37.7
Hippocampus, CA3
nTPM: 97.4
2137 Male, age 80, left hemisphere 226.4
2620 Female, age 94, left hemisphere 106.5
1867 Male, age 76, both hemispheres 87.0
2436 Male, age 74, both hemispheres 61.4
1891 Female, age 85, both hemispheres 59.1
2861 Female, age 67, both hemispheres 44.2
Parahippocampal cortex
nTPM: 56.0
1850 Male, age 80, both hemispheres 95.9
2245 Female, age 91, both hemispheres 77.3
2693 Female, age 94, both hemispheres 61.1
2018 Male, age 76, both hemispheres 57.8
2532 Female, age 72, left hemisphere 57.2
1990 Female, age 91, right hemisphere 55.4
1933 Female, age 85, both hemispheres 49.7
2250 Female, age 67, right hemisphere 47.8
2622 Female, age 67, right hemisphere 40.0
2692 Male, age 74, both hemispheres 18.0
Perirhinal gyrus
nTPM: 81.9
1841 Female, age 85, right hemisphere 114.7
1794 Male, age 80, right hemisphere 102.1
1847 Female, age 91, left hemisphere 83.2
2521 Female, age 94, right hemisphere 57.6
2848 Male, age 76, right hemisphere 52.1
Subiculum
nTPM: 49.2
1901 Male, age 80, both hemispheres 99.5
2042 Male, age 76, both hemispheres 56.7
1977 Female, age 85, both hemispheres 45.8
2729 Female, age 91, right hemisphere 37.5
2438 Female, age 94, left hemisphere 34.0
2619 Male, age 74, both hemispheres 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.8
Samples: 197

Max nTPM: 422.6
Min nTPM: 12.8
Std nTPM: 54.7
Median nTPM: 84.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 422.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 228.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 227.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 222.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 206.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 203.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 202.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 189.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 189.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 188.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 185.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.3
FF:10169-103B7 60 years, female 174.7
FF:10153-102I9 76 years, female 86.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 403.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 403.2
Samples: 4

Max nTPM: 470.3
Min nTPM: 289.2
Sample A Female 470.3
Sample B Female 460.0
Sample C Male 289.2
Sample D Male 393.4
Entorhinal cortex
nTPM: 227.3
Samples: 4

Max nTPM: 255.6
Min nTPM: 197.9
Sample A Female 255.6
Sample B Female 251.2
Sample C Male 197.9
Sample D Male 204.6
Subiculum
nTPM: 155.2
Samples: 4

Max nTPM: 207.7
Min nTPM: 127.9
Sample A Female 207.7
Sample B Female 127.9
Sample C Male 154.3
Sample D Male 131.0
Ventral hippocampus
nTPM: 268.3
Samples: 4

Max nTPM: 579.8
Min nTPM: 147.4
Sample A Female 161.7
Sample B Female 184.2
Sample C Male 147.4
Sample D Male 579.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 986.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 573.2
Samples: 4

Max nTPM: 615.9
Min nTPM: 513.4
Sample A Male 615.9
Sample B Male 590.1
Sample C Female 573.5
Sample D Female 513.4
Hippocampal formation
nTPM: 986.0
Samples: 4

Max nTPM: 1211.8
Min nTPM: 799.2
Sample A Male 852.6
Sample B Male 1080.5
Sample C Female 1211.8
Sample D Female 799.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
73817435 Antisense, RP_051101_01_A11, Mouse strain C57BL/6J (56 days, male) 18.0
69817246 Antisense, RP_050510_02_H10, Mouse strain C57BL/6J (56 days, male) 17.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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