HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:106.5 nTPM
HPA:106.5 nTPM
GTEx:89.5 nTPM
FANTOM5:82.5 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:58.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.5
Sample id Sample description nTPM
Hippocampus
nTPM: 106.5
1898 Male, age 80, left hemisphere 110.6
2529 Female, age 94, left hemisphere 110.2
1855 Male, age 76, left hemisphere 108.5
1911 Female, age 85, right hemisphere 105.6
2621 Female, age 67, right hemisphere 103.6
2148 Female, age 91, left hemisphere 100.7
Dentate gyrus
nTPM: 104.5
2530 Female, age 94, left hemisphere 113.6
2010 Male, age 76, both hemispheres 112.5
2246 Female, age 85, both hemispheres 104.9
1927 Female, age 91, both hemispheres 99.1
2531 Female, age 67, both hemispheres 98.5
2528 Male, age 74, both hemispheres 98.3
Entorhinal gyrus
nTPM: 102.9
1938 Female, age 85, left hemisphere 107.4
2117 Female, age 91, right hemisphere 104.4
2686 Male, age 75, right hemisphere 103.2
1787 Male, age 76, left hemisphere 102.4
2764 Male, age 80, right hemisphere 101.8
2613 Female, age 94, left hemisphere 98.3
Hippocampus, CA1
nTPM: 104.9
2749 Male, age 80, left hemisphere 110.9
1873 Female, age 85, both hemispheres 105.5
2527 Male, age 74, both hemispheres 104.4
2045 Male, age 76, both hemispheres 103.7
2082 Female, age 91, right hemisphere 100.1
Hippocampus, CA2
nTPM: 105.3
1963 Male, age 80, left hemisphere 110.3
1892 Male, age 76, both hemispheres 106.5
2249 Male, age 74, both hemispheres 106.2
1940 Female, age 85, left hemisphere 104.7
2437 Female, age 94, left hemisphere 104.4
2113 Female, age 91, right hemisphere 99.8
Hippocampus, CA3
nTPM: 100.3
1867 Male, age 76, both hemispheres 104.3
2137 Male, age 80, left hemisphere 104.1
1891 Female, age 85, both hemispheres 103.0
2436 Male, age 74, both hemispheres 98.8
2620 Female, age 94, left hemisphere 95.7
2861 Female, age 67, both hemispheres 95.6
Parahippocampal cortex
nTPM: 102.3
2018 Male, age 76, both hemispheres 109.1
1850 Male, age 80, both hemispheres 104.5
2245 Female, age 91, both hemispheres 104.2
2532 Female, age 72, left hemisphere 104.1
1933 Female, age 85, both hemispheres 103.8
2250 Female, age 67, right hemisphere 101.9
1990 Female, age 91, right hemisphere 101.1
2692 Male, age 74, both hemispheres 100.8
2622 Female, age 67, right hemisphere 97.6
2693 Female, age 94, both hemispheres 96.4
Perirhinal gyrus
nTPM: 102.8
1841 Female, age 85, right hemisphere 104.6
2848 Male, age 76, right hemisphere 104.1
1794 Male, age 80, right hemisphere 102.7
1847 Female, age 91, left hemisphere 102.0
2521 Female, age 94, right hemisphere 100.6
Subiculum
nTPM: 106.1
2042 Male, age 76, both hemispheres 113.4
2438 Female, age 94, left hemisphere 111.9
1977 Female, age 85, both hemispheres 105.9
1901 Male, age 80, both hemispheres 105.8
2619 Male, age 74, both hemispheres 100.0
2729 Female, age 91, right hemisphere 99.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.5
Samples: 197

Max nTPM: 206.2
Min nTPM: 35.8
Std nTPM: 26.9
Median nTPM: 86.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 206.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 184.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 183.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 183.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 170.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 169.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 152.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 152.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 151.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 140.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 138.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.5
FF:10153-102I9 76 years, female 90.8
FF:10169-103B7 60 years, female 74.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.4
Sample A Female 13.4
Sample B Female 10.4
Sample C Male 12.9
Sample D Male 11.2
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.8
Sample A Female 11.2
Sample B Female 12.3
Sample C Male 9.8
Sample D Male 11.8
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.0
Sample A Female 13.4
Sample B Female 10.9
Sample C Male 10.0
Sample D Male 11.2
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.8
Sample A Female 12.0
Sample B Female 9.5
Sample C Male 7.8
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.4
Samples: 4

Max nTPM: 70.8
Min nTPM: 49.5
Sample A Male 55.7
Sample B Male 70.8
Sample C Female 57.4
Sample D Female 49.5
Hippocampal formation
nTPM: 55.5
Samples: 4

Max nTPM: 61.8
Min nTPM: 50.6
Sample A Male 61.8
Sample B Male 52.0
Sample C Female 50.6
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68862150 Antisense, RP_050301_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0

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