HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.1 nTPM
HPA:26.1 nTPM
GTEx:24.2 nTPM
FANTOM5:27.3 Scaled Tags Per Million
Pig:31.0 nTPM
Mouse:170.4 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042268
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
1898 Male, age 80, left hemisphere 26.5
2148 Female, age 91, left hemisphere 25.4
2529 Female, age 94, left hemisphere 23.7
1911 Female, age 85, right hemisphere 23.6
2621 Female, age 67, right hemisphere 23.2
1855 Male, age 76, left hemisphere 21.9
Dentate gyrus
nTPM: 25.2
1927 Female, age 91, both hemispheres 26.1
2528 Male, age 74, both hemispheres 25.7
2010 Male, age 76, both hemispheres 25.6
2531 Female, age 67, both hemispheres 25.3
2246 Female, age 85, both hemispheres 24.2
2530 Female, age 94, left hemisphere 24.1
Entorhinal gyrus
nTPM: 25.1
2613 Female, age 94, left hemisphere 25.9
1938 Female, age 85, left hemisphere 25.6
2764 Male, age 80, right hemisphere 25.2
1787 Male, age 76, left hemisphere 25.1
2686 Male, age 75, right hemisphere 24.6
2117 Female, age 91, right hemisphere 24.0
Hippocampus, CA1
nTPM: 26.1
2749 Male, age 80, left hemisphere 31.5
1873 Female, age 85, both hemispheres 25.7
2527 Male, age 74, both hemispheres 25.6
2082 Female, age 91, right hemisphere 24.7
2045 Male, age 76, both hemispheres 23.2
Hippocampus, CA2
nTPM: 25.7
1963 Male, age 80, left hemisphere 31.2
2249 Male, age 74, both hemispheres 25.8
1892 Male, age 76, both hemispheres 25.2
2437 Female, age 94, left hemisphere 24.5
2113 Female, age 91, right hemisphere 24.0
1940 Female, age 85, left hemisphere 23.4
Hippocampus, CA3
nTPM: 25.8
2137 Male, age 80, left hemisphere 28.4
2620 Female, age 94, left hemisphere 26.6
2436 Male, age 74, both hemispheres 25.9
1891 Female, age 85, both hemispheres 25.0
2861 Female, age 67, both hemispheres 24.6
1867 Male, age 76, both hemispheres 24.5
Parahippocampal cortex
nTPM: 25.3
2693 Female, age 94, both hemispheres 27.8
1850 Male, age 80, both hemispheres 26.8
2692 Male, age 74, both hemispheres 26.3
2250 Female, age 67, right hemisphere 26.1
1990 Female, age 91, right hemisphere 25.5
2532 Female, age 72, left hemisphere 25.1
1933 Female, age 85, both hemispheres 24.4
2245 Female, age 91, both hemispheres 24.2
2622 Female, age 67, right hemisphere 24.1
2018 Male, age 76, both hemispheres 22.8
Perirhinal gyrus
nTPM: 25.6
1847 Female, age 91, left hemisphere 26.9
1841 Female, age 85, right hemisphere 26.1
1794 Male, age 80, right hemisphere 25.3
2521 Female, age 94, right hemisphere 24.9
2848 Male, age 76, right hemisphere 24.7
Subiculum
nTPM: 24.6
1977 Female, age 85, both hemispheres 26.8
2729 Female, age 91, right hemisphere 25.1
1901 Male, age 80, both hemispheres 25.0
2619 Male, age 74, both hemispheres 24.3
2438 Female, age 94, left hemisphere 24.2
2042 Male, age 76, both hemispheres 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.2
Samples: 197

Max nTPM: 56.0
Min nTPM: 6.1
Std nTPM: 7.9
Median nTPM: 22.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 53.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 41.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 40.0
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 39.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 39.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 38.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 38.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 37.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.3
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 24.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 38.2
Min nTPM: 25.6
Sample A Female 38.2
Sample B Female 31.2
Sample C Male 29.1
Sample D Male 25.6
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 35.8
Min nTPM: 24.1
Sample A Female 32.2
Sample B Female 35.8
Sample C Male 24.4
Sample D Male 24.1
Subiculum
nTPM: 26.9
Samples: 4

Max nTPM: 31.5
Min nTPM: 24.3
Sample A Female 31.5
Sample B Female 26.5
Sample C Male 25.4
Sample D Male 24.3
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 34.9
Min nTPM: 22.3
Sample A Female 31.6
Sample B Female 22.3
Sample C Male 34.9
Sample D Male 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 170.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.2
Samples: 4

Max nTPM: 159.9
Min nTPM: 155.8
Sample A Male 155.8
Sample B Male 157.2
Sample C Female 159.9
Sample D Female 159.9
Hippocampal formation
nTPM: 170.4
Samples: 4

Max nTPM: 184.4
Min nTPM: 159.7
Sample A Male 184.4
Sample B Male 159.7
Sample C Female 165.9
Sample D Female 171.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
70523706 Antisense, RP_050301_02_A09, Mouse strain C57BL/6J (56 days, male) 15.1

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