COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Low
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.1 nTPM
HPA:22.1 nTPM
GTEx:15.9 nTPM
FANTOM5:32.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA028934
Endothelial cells Not detected
Glandular cells Low
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 22.1
overview
Male, age 54 		Colon sample 67
nTPM: 14.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 16.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 11.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 32.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 20.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 47.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 24.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 20.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 23.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 25.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 23.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.4
Samples: 373

Max nTPM: 65.0
Min nTPM: 3.3
Std nTPM: 9.3
Median nTPM: 11.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 65.0
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 62.0
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 52.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 48.9
GTEX-1HBPM-2626-SM-9WYU5 60-69 years, female 42.3
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 41.7
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 41.5
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 39.2
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 37.9
GTEX-183WM-2526-SM-731BP 70-79 years, female 37.8
GTEX-1H3NZ-2526-SM-9KNVO 60-69 years, male 37.2
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Colon - Transverse
Average nTPM: 15.9
Samples: 406

Max nTPM: 79.0
Min nTPM: 4.1
Std nTPM: 8.9
Median nTPM: 13.9
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 79.0
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 64.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 47.5
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 44.8
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 42.4
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 42.0
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 41.4
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 41.1
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 39.8
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 39.7
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 38.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 32.5
FF:10014-101C5 62,83,84 years, mixed 32.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.