HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:38.6 nTPM
FANTOM5:193.5 Scaled Tags Per Million
Pig:76.7 nTPM
Mouse:72.1 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.3
2529 Female, age 94, left hemisphere 34.9
1898 Male, age 80, left hemisphere 33.2
1911 Female, age 85, right hemisphere 31.7
1855 Male, age 76, left hemisphere 28.2
2621 Female, age 67, right hemisphere 25.0
2148 Female, age 91, left hemisphere 22.8
Dentate gyrus
nTPM: 29.5
2530 Female, age 94, left hemisphere 34.1
2010 Male, age 76, both hemispheres 31.0
2528 Male, age 74, both hemispheres 29.1
1927 Female, age 91, both hemispheres 28.5
2246 Female, age 85, both hemispheres 28.1
2531 Female, age 67, both hemispheres 26.4
Entorhinal gyrus
nTPM: 26.8
2117 Female, age 91, right hemisphere 34.0
2764 Male, age 80, right hemisphere 30.1
1938 Female, age 85, left hemisphere 29.9
1787 Male, age 76, left hemisphere 26.9
2686 Male, age 75, right hemisphere 21.8
2613 Female, age 94, left hemisphere 18.0
Hippocampus, CA1
nTPM: 29.1
2749 Male, age 80, left hemisphere 34.1
1873 Female, age 85, both hemispheres 31.5
2527 Male, age 74, both hemispheres 26.9
2045 Male, age 76, both hemispheres 26.8
2082 Female, age 91, right hemisphere 26.4
Hippocampus, CA2
nTPM: 30.2
1940 Female, age 85, left hemisphere 35.7
1892 Male, age 76, both hemispheres 32.6
2249 Male, age 74, both hemispheres 32.0
2437 Female, age 94, left hemisphere 30.1
1963 Male, age 80, left hemisphere 25.6
2113 Female, age 91, right hemisphere 25.5
Hippocampus, CA3
nTPM: 31.5
2137 Male, age 80, left hemisphere 39.5
1867 Male, age 76, both hemispheres 38.7
1891 Female, age 85, both hemispheres 35.0
2620 Female, age 94, left hemisphere 31.4
2436 Male, age 74, both hemispheres 25.1
2861 Female, age 67, both hemispheres 19.2
Parahippocampal cortex
nTPM: 29.4
1850 Male, age 80, both hemispheres 38.3
2532 Female, age 72, left hemisphere 37.3
2693 Female, age 94, both hemispheres 32.1
2692 Male, age 74, both hemispheres 30.6
1990 Female, age 91, right hemisphere 29.7
1933 Female, age 85, both hemispheres 29.4
2245 Female, age 91, both hemispheres 29.2
2018 Male, age 76, both hemispheres 25.5
2250 Female, age 67, right hemisphere 24.6
2622 Female, age 67, right hemisphere 17.6
Perirhinal gyrus
nTPM: 32.9
1841 Female, age 85, right hemisphere 37.4
1794 Male, age 80, right hemisphere 35.1
2521 Female, age 94, right hemisphere 32.4
2848 Male, age 76, right hemisphere 32.2
1847 Female, age 91, left hemisphere 27.2
Subiculum
nTPM: 31.5
1901 Male, age 80, both hemispheres 42.8
2042 Male, age 76, both hemispheres 35.0
1977 Female, age 85, both hemispheres 33.1
2438 Female, age 94, left hemisphere 31.6
2619 Male, age 74, both hemispheres 24.9
2729 Female, age 91, right hemisphere 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.6
Samples: 197

Max nTPM: 95.8
Min nTPM: 13.1
Std nTPM: 12.5
Median nTPM: 36.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 95.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 91.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 70.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 69.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 67.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 65.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 63.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 63.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 62.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 60.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 193.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.5
FF:10153-102I9 76 years, female 221.7
FF:10169-103B7 60 years, female 165.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.7
Samples: 4

Max nTPM: 89.8
Min nTPM: 62.1
Sample A Female 89.8
Sample B Female 73.4
Sample C Male 81.4
Sample D Male 62.1
Entorhinal cortex
nTPM: 65.3
Samples: 4

Max nTPM: 73.1
Min nTPM: 57.9
Sample A Female 67.6
Sample B Female 73.1
Sample C Male 57.9
Sample D Male 62.4
Subiculum
nTPM: 63.1
Samples: 4

Max nTPM: 78.7
Min nTPM: 55.4
Sample A Female 78.7
Sample B Female 59.4
Sample C Male 58.8
Sample D Male 55.4
Ventral hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 78.1
Min nTPM: 54.5
Sample A Female 66.7
Sample B Female 54.5
Sample C Male 58.6
Sample D Male 78.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.3
Samples: 4

Max nTPM: 63.6
Min nTPM: 58.5
Sample A Male 63.6
Sample B Male 61.5
Sample C Female 58.5
Sample D Female 61.7
Hippocampal formation
nTPM: 72.1
Samples: 4

Max nTPM: 79.4
Min nTPM: 62.7
Sample A Male 62.7
Sample B Male 79.4
Sample C Female 79.1
Sample D Female 67.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
71022744 Antisense, RP_050719_01_E04, Mouse strain C57BL/6J (56 days, male) 12.8

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