HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.2 nTPM
HPA:16.2 nTPM
GTEx:16.5 nTPM
FANTOM5:18.1 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:38.6 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
2529 Female, age 94, left hemisphere 19.1
1898 Male, age 80, left hemisphere 16.4
1855 Male, age 76, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.2
2621 Female, age 67, right hemisphere 15.1
2148 Female, age 91, left hemisphere 15.0
Dentate gyrus
nTPM: 16.0
2010 Male, age 76, both hemispheres 18.0
2530 Female, age 94, left hemisphere 16.7
2528 Male, age 74, both hemispheres 16.5
2246 Female, age 85, both hemispheres 16.0
2531 Female, age 67, both hemispheres 15.5
1927 Female, age 91, both hemispheres 13.5
Entorhinal gyrus
nTPM: 15.6
2117 Female, age 91, right hemisphere 17.0
1787 Male, age 76, left hemisphere 16.3
2764 Male, age 80, right hemisphere 16.0
2686 Male, age 75, right hemisphere 15.5
1938 Female, age 85, left hemisphere 15.2
2613 Female, age 94, left hemisphere 14.0
Hippocampus, CA1
nTPM: 15.3
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 15.7
1873 Female, age 85, both hemispheres 15.3
2045 Male, age 76, both hemispheres 14.6
2749 Male, age 80, left hemisphere 14.3
Hippocampus, CA2
nTPM: 15.6
2249 Male, age 74, both hemispheres 17.1
1940 Female, age 85, left hemisphere 16.7
2113 Female, age 91, right hemisphere 16.1
1963 Male, age 80, left hemisphere 16.0
2437 Female, age 94, left hemisphere 14.9
1892 Male, age 76, both hemispheres 13.1
Hippocampus, CA3
nTPM: 15.4
2436 Male, age 74, both hemispheres 18.0
1891 Female, age 85, both hemispheres 16.1
2620 Female, age 94, left hemisphere 15.1
1867 Male, age 76, both hemispheres 14.8
2861 Female, age 67, both hemispheres 14.3
2137 Male, age 80, left hemisphere 13.9
Parahippocampal cortex
nTPM: 15.7
2018 Male, age 76, both hemispheres 17.6
2692 Male, age 74, both hemispheres 16.5
1850 Male, age 80, both hemispheres 16.2
2532 Female, age 72, left hemisphere 16.1
1990 Female, age 91, right hemisphere 15.8
2622 Female, age 67, right hemisphere 15.1
1933 Female, age 85, both hemispheres 15.0
2250 Female, age 67, right hemisphere 15.0
2245 Female, age 91, both hemispheres 14.8
2693 Female, age 94, both hemispheres 14.6
Perirhinal gyrus
nTPM: 15.2
1794 Male, age 80, right hemisphere 17.2
2521 Female, age 94, right hemisphere 15.3
1847 Female, age 91, left hemisphere 15.1
1841 Female, age 85, right hemisphere 14.9
2848 Male, age 76, right hemisphere 13.6
Subiculum
nTPM: 16.2
2438 Female, age 94, left hemisphere 17.1
2729 Female, age 91, right hemisphere 17.0
2042 Male, age 76, both hemispheres 16.2
2619 Male, age 74, both hemispheres 15.8
1977 Female, age 85, both hemispheres 15.6
1901 Male, age 80, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 31.1
Min nTPM: 9.8
Std nTPM: 3.4
Median nTPM: 15.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 31.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 26.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 26.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 23.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 23.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 23.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.1
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 16.1
Min nTPM: 10.7
Sample A Female 16.1
Sample B Female 13.9
Sample C Male 12.2
Sample D Male 10.7
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 12.4
Min nTPM: 10.6
Sample A Female 11.6
Sample B Female 12.4
Sample C Male 11.0
Sample D Male 10.6
Subiculum
nTPM: 10.6
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.1
Sample A Female 13.9
Sample B Female 9.7
Sample C Male 9.8
Sample D Male 9.1
Ventral hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.3
Sample A Female 11.5
Sample B Female 9.3
Sample C Male 13.0
Sample D Male 13.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 34.0
Min nTPM: 33.4
Sample A Male 33.7
Sample B Male 34.0
Sample C Female 33.4
Sample D Female 33.6
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 40.0
Min nTPM: 36.4
Sample A Male 40.0
Sample B Male 38.9
Sample C Female 36.4
Sample D Female 39.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
75749399 Antisense, RP_060518_01_B08, Mouse strain C57BL/6J (56 days, male) 6.5
71664148 Antisense, RP_050927_04_G09, Mouse strain C57BL/6J (56 days, male) 4.7

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The Human Protein Atlas

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